Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1335 ATGGAAATGGTACTACTTTCTAGAGAAACCATCAAACCTTCATCCCCAACTCCTTCTTATCTTAGAATATATCCACTCTCCTTTATAGATAACATTTTTTACCGTAAATATGTGCCAGCACTTTTCTTTTACAACACAAACGATTGTAGTAACCAAAATTTTAAAATATCACAACTTCGTAAGTCCTTATCTCAAGTTCTATCTAAATACTACCCTTTTGCTGGCAAGTTGAGAGATAAAACCAGCATTGAGTGTAATGATCAAGGTGTGTCATTTCTCGTCACAAAGATCCAAAAAAAATTATCAGAGATTCTCCAAAATCCGACGGAAAAATTGTTGAATCCTTTGTTCCCTGATGAATTACAATGGAAAGACATGGATTGGAGCGGAACTTTAATAGTCATACAAATCAATTGTTTTGCGTGTGGAGGGATCGCGATAAGTATTTGCATGACTCACAAAGTTGGTGATGGTACCACTCTTTTCAACTTCATGAATGATTGGGCCATCATCAACCAAAAGGTAGAGCAAGAAGAAGAAGGGTTATTAGTATTACCCGTCCCTATACTTGGCGAAGGGGCTTCGATTTTTTCCCAGAAGGACTTACCTATTTTTCCAGAACTCAAGCTTGTGAAGGGAAACAAGATGGTGTGCAAAACATTTGTGTTTCAAGCGTCAATGATTAAGTCTCTCAAGACAATGTTAACTAATTCTAGAAATTCTCCCACACGCGTACAAGTTGTAACTGCATTGATTTACAAGCGTGCGGTTTCAACAATGGGATTAAATTTCAAGACAGCGCCATTCAGCACGGTTGTGGACCTTCGCAGAAGAATGGTTCCTCCATTGTCAGAAAGTTATGTAGGGAACATAATTTGGTTCTCGTCTACGCACATAGATAAGAAGGAAATGGAGCTGCCGGATTTGGTATGCAAAATAAAACATGGATTATATGAGTTTTGTGACGTTTATCCTAAAAAATTTGCAGGAAAAGAAAAGGACGATTTGTCGTTCATTTCCGGGTGCTTGGAACATGTTAACGATTCTTATTCTGATGATCAAACTATGTTTACTTTTAGTAGTTGGTGTGGATTTCCAATATATGAAGTAGATTTTGGGTGGGGAAAACCAACATGGGTCACAACTTTTGGTAGTTCTTTGAGGAATCTAATATTTATGATGGATACTAGAGATGGGGTTGGGATTGAAGCATATGTGAACATGGAAGAGAGTGATATGGCTAGGTTTGAGAATGATGTTGAGCTTCTTAAGTATGCCTCTCTTAATCCAAGTAATGTTGAACATGATTCATAA 1314 0.3744 MEMVLLSRETIKPSSPTPSYLRIYPLSFIDNIFYRKYVPALFFYNTNDCSNQNFKISQLRKSLSQVLSKYYPFAGKLRDKTSIECNDQGVSFLVTKIQKKLSEILQNPTEKLLNPLFPDELQWKDMDWSGTLIVIQINCFACGGIAISICMTHKVGDGTTLFNFMNDWAIINQKVEQEEEGLLVLPVPILGEGASIFSQKDLPIFPELKLVKGNKMVCKTFVFQASMIKSLKTMLTNSRNSPTRVQVVTALIYKRAVSTMGLNFKTAPFSTVVDLRRRMVPPLSESYVGNIIWFSSTHIDKKEMELPDLVCKIKHGLYEFCDVYPKKFAGKEKDDLSFISGCLEHVNDSYSDDQTMFTFSSWCGFPIYEVDFGWGKPTWVTTFGSSLRNLIFMMDTRDGVGIEAYVNMEESDMARFENDVELLKYASLNPSNVEHDS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1335 437 Gene3D - 213 427 IPR023213 -
Tpr3g1335 437 Pfam Transferase family 6 422 - -
Tpr3g1335 437 PANTHER F21J9.9 6 433 - -
Tpr3g1335 437 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 433 - -
Tpr3g1335 437 Gene3D - 1 202 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1335 Tpr-Chr3 11828159 11829723 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1335 1 417 Monolignol Biosynthesis Gene Families AT5G48930 22.398 1.28e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1335 - - gmx:100806928 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1335 3 11828159 11829723 Tpr3g1335 3 11828159 11829723 ECH