Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1334 ATGTCTGACGTTGCTCAAATGCTTCACAAGACTTTGATGGCTTATGCTGAGGCAGTTGAACAGAACAATATACCTCTAGCGGAAGATATTGCCAAACCGATCAAATACCTAGCTGCATTACAAAAACCCGCTACGAGTAAAGTTGCTACCTATTTCGCCGAAGCTCTCGCTCGGCGAATCCACGGTATGTTTCCACAACATTCCATTTCTGCTTCCCTTCAGAACCATTTCTATAAAGCTTGTCCTCACCTAAAAGTAGCTCATTTCACCGCGAATCAAGCTATTCTCGAAGCTTTTCAAGGAAAATCTCGTGTTCATGTCATTGATTTTTCCATCAATGAAGGAATACAGTGGCAGGAGCTTATGCGGGCGCTTGCCTTGCGTCCCGGTGGTCCTCATGCCTTTCGTCTCACCGGAGTAGGATCTCCGGCTTCTGATAACTCCGATCACCTCCAACAGGTTGGTTGGAAGCTTGCTCAGCTTGCACAAACGTTTGGTGTTGAGTTTAAGTATCGCCGTGTTGTTGTTAATAGTCTCGCTGATCTAGAAGCTTCTATGCTTGAACTCCGTTCGCCGGAGACTGAATCTGTTGCTGTTAACTCTGTTTTTGAACTTCATAAACTTAACGCGCGTCCCGGCTCGCTTGAGAGAGTATTTTCTGTTATCCGTCAGATTCAGCCGGAGATTGTAACCGTAGTCGAACAAGAAGCAAATCACAACGGATCGAGTTTTCTGGACCGGTTTACCGAGTCGCTGTACTATTATTCAGCTCTGTTTGACTCGCTGGAGAGTTCGTTGGCTGAACCGCAGGACAAGGCTATGTCAGAGGTGTATCTTGGGAAGCAAATTTGCAACGTGGTGGCGTGTGAAGGAACGGACCGGGTTGAGCGTCATGAGACTTTGAACCAGTGGAGGAACCGGTTCGGTTGGGCTGGATTTTCTCCGGTACATTTGGGATCTAATGCGTTAATGCGAGCGAGTCTGTTGTTGTCGCTTTTCGGCAGGGAGGGTTACAAGGTGGAAGAGAATGATGGTTGTCTCATGCATGGTTGGAACGCTAGGCCTTTAATTGTAACCTCTGCTTGGAAACTCGCCGCCGACAACTCGAGTGGTCAATGGTACTTCAATCAGATGGGCTAG 1140 0.4754 MSDVAQMLHKTLMAYAEAVEQNNIPLAEDIAKPIKYLAALQKPATSKVATYFAEALARRIHGMFPQHSISASLQNHFYKACPHLKVAHFTANQAILEAFQGKSRVHVIDFSINEGIQWQELMRALALRPGGPHAFRLTGVGSPASDNSDHLQQVGWKLAQLAQTFGVEFKYRRVVVNSLADLEASMLELRSPETESVAVNSVFELHKLNARPGSLERVFSVIRQIQPEIVTVVEQEANHNGSSFLDRFTESLYYYSALFDSLESSLAEPQDKAMSEVYLGKQICNVVACEGTDRVERHETLNQWRNRFGWAGFSPVHLGSNALMRASLLLSLFGREGYKVEENDGCLMHGWNARPLIVTSAWKLAADNSSGQWYFNQMG* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1334 379 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 5 364 IPR005202 -
Tpr3g1334 379 PANTHER DELLA PROTEIN GAI-RELATED 5 364 - -
Tpr3g1334 379 Pfam GRAS domain family 9 363 IPR005202 -
Tpr3g1334 379 ProSiteProfiles GRAS family profile. 1 363 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1334 Tpr-Chr3 11824840 11826285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1334 12 366 GRAS Transcription Factor Family AT2G01570 67.590 1.76e-175 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr3g1334 GRAS 1.4e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1334 K14494 - gmx:547718 516.538