Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1333 ATGGAACTTGAAATAATATCAAGAGAGTTCATCAAACCCTCATCACCAACTCCTCCTCACCTTAGAAAATTTCCCCTCTCTTTTATAGATCACATTACTGTCCGTAACTATGTGCCTCTACTTTTCTTTTACAATGATATCAAAGTTTGTGACCAAACATCCAAAATCTCACACCTTAAGAATTCCTTGTCTCAAATTCTATCCATATATTATCCCTTTGCAGGTAGGTTTAAAGATCAACTTTCCATCGAATGTAACGATCAAGGTGTGTCATTTCTAGTCGCAAATATCACAGAAACAAAATTATCGACAATCCTCCAAAACCCAACTGAAAATGTGCTTAACCCTTTGTTTCCCGATGAATTACAATGGAAGAAAATGGATTGGAATGAAAGTATTTTAGTCATTCAAATCAATTGTTTTGCATGTGGAGGATTCGTAATAAGTGTTTGTGCTTGTCACAAAATTATTGATGCTGCAACCGCTTTCAATTTTATGAACGATTGGGCCAAACTGAACCGTGAAGAAGGAGATTCAAATTCAAAGTTATTGTTACCCAACAATTTACTTTATGCGGGTGATACAATATTTCCACAAGGTAACTTGCCAAAATTTCCGGAACGCGAGTTTGTGATAGATAAAACAATAGTGTGTAAAAGATTTGTGTTTGAAGCTTCTAAGATAAAGTTACTTAAGAACATGGTAAATTCTGATTCCCCTACTGTGAAAAATCCCACACGTGTAGAAGTTGTCATGTCACTAATTTACAAGAGTGTGATTTCTGCATTAGGATTAAATTACAAAACAACATCGCTTCGCATGGCTGTAGATCTTCGCAAAAGAATGGTTCCTCTATTGTCTAAAAAGTCTGTAGGAAACTTGATTTGGTTCTTAGTTGTTACGAACCCAGAATCACATGACTTGATATTCAAAATTAGGCAAGGGATGTGTGAGTTTTGTGAGGTTTATCCAAAGAAATTTGGAGGGGAAGAAAAAGACTTTTCCTTTATTTTTGAATGTTTAAAACAAGATACTACTTCAGTTACAAAGAGTAATAATGATCAAAGTTGGATTCTTTTTTCTAGTTGGTGTAGATTTCCAATCTATGAAGTTGATTTTGGATGGGGAAAACCAATATGGGTGACAACTAGTACTTGTCCGGTGAGAAATGCAATAGTTTTGATGGATACAAAAGATGGAGATGGGATTGAAGCGATTGTAAATATGGAAGAGAATGATATGATTATGTTTGAGCATGATGTGGAGCTCCTTCAATATGCTTCTCTGAATCCTAGTATTCTATGTAACTAA 1311 0.3494 MELEIISREFIKPSSPTPPHLRKFPLSFIDHITVRNYVPLLFFYNDIKVCDQTSKISHLKNSLSQILSIYYPFAGRFKDQLSIECNDQGVSFLVANITETKLSTILQNPTENVLNPLFPDELQWKKMDWNESILVIQINCFACGGFVISVCACHKIIDAATAFNFMNDWAKLNREEGDSNSKLLLPNNLLYAGDTIFPQGNLPKFPEREFVIDKTIVCKRFVFEASKIKLLKNMVNSDSPTVKNPTRVEVVMSLIYKSVISALGLNYKTTSLRMAVDLRKRMVPLLSKKSVGNLIWFLVVTNPESHDLIFKIRQGMCEFCEVYPKKFGGEEKDFSFIFECLKQDTTSVTKSNNDQSWILFSSWCRFPIYEVDFGWGKPIWVTTSTCPVRNAIVLMDTKDGDGIEAIVNMEENDMIMFEHDVELLQYASLNPSILCN* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1333 436 Gene3D - 1 199 IPR023213 -
Tpr3g1333 436 Pfam Transferase family 1 423 - -
Tpr3g1333 436 PANTHER F21J9.9 4 433 - -
Tpr3g1333 436 Gene3D - 213 428 IPR023213 -
Tpr3g1333 436 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1333 Tpr-Chr3 11824622 11827617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1333 1 418 Monolignol Biosynthesis Gene Families AT5G48930 24.368 1.80e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1333 - - gmx:100806928 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1333 3 11824622 11827617 Tpr3g1333 3 11824622 11827617 ECH