Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1329 ATGACAATTTTAGATGTTTTCCTAGGAACAACAAATGTAACATTTTTCTATGTGATTTTGATATGGGTTTTATTTGATAGTTTAAGATTAACCAAAAGTAACAATCTTTTACATTTTAAACACACACCAACAATTTTTGCTTATATCACTGTTTTTTTCAGTGCTGTTATTTCTATTTTTAATGTAGCTTTTGTTTTCTATGATTATGTTACTAATGGAATCATAGGATTTAGCTTTGTTTCATTGGTTTTAACTTGGGTTTTAGCTACTTTTGTTTCATTTTATTCAATGAAGAACACACTTAAGGAGAGTAAAAGATTCCCTTTTGTTCTAATTCTTTGGTGGCTTTTTGTTACTTTTGTTGATATAATCTCATTGGCTTTTAAACTTGTCAAAAATTATGATTCCATGATGAACTTATGGATTTTGTTGTTGGAGGAAGAGAACATTGTTGATGTAGTTTCTTTGCCTATGTTGTTAGTACTATGTTTCAATGCACTTCCAAATGCTTGTGTAAAGGAACAAAGTGAAATAGAACAAAGGTTACTTCATAAAGAGTTTGAATCTTCTACTTTGGGAGATGAAAGTGAAGAAGCTTTTGTGAAAGCTGGTTTATGGAGTAAACTTACATTTAGGTGGTTGAATCCGATTTTTGAAATCGGTCGGATTCAGAAACTTGAACATGTTCATGTTCCTTCTGTTCCTCATTCTGAGACTGCTGCTAGTGCTTCTTCTATGTTGGAAGAATCTATTAGGAAACAGAAACTTCAAGGTGGTTCATTGACAAAAGCTATTGTCCATTCTGTTTGGAAATCATTAGCCTTAAATGCTGTTTTAGCAGGTGTTAATACTATTGCTTCTTATATTGGTCCGTTGTTGATATCGAACTTTGTGAATTTTCTATTGTCGAATGATGATAATTCAAATATCAAATATGGAATGATTCTTGCCTTTATTTTCTTCCTGTCAAAAACTGTGGAGTCATTGAGTCAAAGACAATGGTACTTTGGCGCTCAGAGAATCGGAATTCAGGTGCGTGCAGCTCTTATGGCACTAGTTTATAGCAAGTCGCTAACGATTAAGTGCGGTGGACCAACACATGGTAAAATCATCAATTTGATTAATGTGGATGTTGAAAGAATCGGTGACTTTTGTTGGTATGTTCATGGAGTATGGTTGCTTCCGGTTCAGATTATTTTGGCCTTGGCGATCTTATACATAAATTTAGGTTACACACCTTCTATTGCTGCACTTGTTGTTACTATTTTGGTCATGGTGTGTAACACGCCTTTGGCTAATATGCAAGAAGGTTTGCATTCGAAGATAATGGAAGCTAAAGATTCAAGAATCAAAATGACTTCAGAGACTATGAAGAACATTAGAATTTTAAAGTTGCATTCATGGGAATCTACATTTCTGCAGAAGCTTTTTCAACTTAGGGACACGGAGAGGAAGTGGTTGCATAAGTACCTCTACTTATGCTCGGCAGTAGCAACTCTATTTTGGGCATCGCCAACTTTGGTTTCTGTTTTCACTTTTGGCGCTTGTATATTGGTGAAAACCGAACTGACTGCAGCCACGGTCCTCTCAGCTCTTGCAACATTTCGTATTTTGCAAGAACCAATTTACAATTTGCCTGAGCTTATTTCCATGATAACTCAAACAAAAGTCTCGGTTGATCGGATTCAGGATTTCATAACTGAAGAAGATCAAAACCAATTCATGAATAAGCATGCTTCCAAAACTTCAACAATTGCTATTGAAATAAAGGCGGGAGAATATGCATGGGAAGAAAATGATCAATACCTCAAGAAACCAACGATTCATATTGTGGAGAAATTATTGATAAAGAAAGGTCAGAAGGTAGCAGTTTGTGGACCAGTAGGGTCTGGAAAATCAAGCTTGCTTTGCAGTATGCTTGGTGAGATTTCATTGGTTTCTGGAGCAGCAACCAAAGTTTATGGGACTAGAAGTTATGTACCACAAAGTCCATGGATTCAATCCGGAACTATAAGAGATAATATATTGTTTGGCAAGCAAATGAATAAGGACTTATATGAAAAAGTTGTGGATGGTTGTGCATTGCTCCAAGATATCAACTTATGGAGTGACGGAGATTTAACCATGGTGGAGGAGAGGGGAATAAATTTAAGCGGAGGACAAAAACAACGAATTCAATTGGCAAGGGCTGTTTACAATGACTCGGATATTTATTTTCTCGATGATCCTTTTAGTGCTGTTGATGCTCATACGGGAAGCCATTTGTTTAAGGAATGTCTTATGAAACTTTTATACGATAAAACTGTGGTCTATGCTACACATCAAATGGAATTCTTGGAAGCTGCAGATCTTATTTTGGTTATGAAAGATGGAAAAATAGTGGAATCTGGAAGGTACAAAGATCTCATCGCGTGTCCTTATAGTGAATTTGTCCAGCAAATGGCTGCTCATGAAGAAACAATATGCCAAATTCCATGCCGGAAAGATGATTCTGTTTGCTGCAGACCTTGCCAAAAAAATCCAATTGAAATCGCAGAAGAAAATATTCAAGAGATCATGATGGATTGGAAGAGAACCAGAGAAGAGGAAGCAATGACTGGTGGAGTAAAATGGAGTGTTTACTCAACCTTTGTCACATTAGCTTATAGAGGAGCACTTGTTCCAGTTATTCTTCTTTGTCAAGTTCTCTTTCAAGTTATGCAGATGGGAAGCAATTATTGGATGTCTTGGGCTACAGAAGAAAAGGGAAGGGTCGACAATGCGCGGCTTATGGGAATATTTGCTCTTTTGTCTGGTGGCAGCTCAGTCTTCATACTGGGAAGAACTGTTTTAATGGCAACAGTTGCCGTGGAGACTGCTCAACGCCTTTTTCAAGGAATGATCACGTCAGTTTTCAGGGCACCTGTTTCTTTTTTTGATACCACACCTTCTAGCCGAATCCTGAGTAGGTCATCTACGGATCAAAGTACGGTAGATACAGACATACCATACAGATTAGCTGGACTAGTTTTTGCACTTATCCAGTTATTGAGTATCATTGTACTAATGTCCCAAGCTGCATGGCAAGTCATTCTTCTCTTTTTTGTGGTTCTTGCTATCTCCGTCTGGTATCAGGCCTATTACATCACTACAGCTAGGGAATTGGCCAGGATGGTGGGGATTCGAAAGGCGCCGATCTTGCATCACTTCTCAGAATCCATTGCTGGGGCTGCCACAATCCGCTGTTTCAATCAAGAGAAAATATTCTTGACCAAGGTTATGGCTCTAATTGACGATTATTCTCGGGTAGCTTTTCACAACTTTGCCACCATGGAATGGTTGTCTGTCAGAATCAATTTTCTCTTCAATTTGGTATTCTACTTTGTTCTCATTATCTTGGTTAGTTTGCCAAGGTCTGCCATTGATCCCAGCTTGGCGGGTCTTGTAGCAACTTATGGTTTGAACTTAAATGTGCTTCAAGCTTGGGTGATATGGAATTTATGCAACGTTGAGAACAAAATGATATCAGTAGAGAGAATATTACAATTCTCTAATATACCAAGTGAAGCGCCATTAATCATTGAAGATTGTAGGCCTGAACCAGAGTGGCCTAAGGAAGGAATAATTGAATTCCTCAACCTTCATATACAATATGATCCTACCGGTCCTATGGTTCTCAAAGGTGTCACTTGCATCTTCCCAGGACAGAAGAAAATTGCAGTAGTAGGCAGGACCGGGAGTGGAAAATCTACTTTGGTGCAAGCCCTCTTTCGAGTGGTGGAGCCTTTGGAAGGATGTATACTCATTGACGGCGTAAATATTTCTAAGATCGGTCTGCAAGATTTAAGATCTAAGCTTGGTATCATTCCTCAGGATCCAACCTTGTTTTTAGGTACTGTGAGGACTAATTTGGATCCCTTGGAACAACATACCGATCAAGAACTTTGGGAGGTTCTCAGCAAATGCCATCTCGCCGAAATAGTACAGCAAGATCCACGGCTTCTTGATGCACCAGTGGCCGAGAATGGAGAAAATTGGAGTGTTGGACAGAGGCAACTAGTTTGCCTTGCTAGGCTACTACTTAAGAAAAGAAAAATTTTGGTCCTGGATGAGGCAACTGCATCCATCGACACTGCAACTGATAATTTAATTCAAAAGACTATCAGAGAAGAAACAAGTGGATGCACAGTTATTACAGTAGCACATAGAATTCCCACTGTCATTGACAATGATTTGGTTTTGGTCCTTAATGAAGGGACGATAGCAGAATATGATAAACCATCTCAATTGCTACAAGATAGTTCTTCTTCGTTCTCAAAGTTGGTTTCGGAATTTTTGAGGAGATCGTCTCAAAGTAACTGCTAA 4344 0.3835 MTILDVFLGTTNVTFFYVILIWVLFDSLRLTKSNNLLHFKHTPTIFAYITVFFSAVISIFNVAFVFYDYVTNGIIGFSFVSLVLTWVLATFVSFYSMKNTLKESKRFPFVLILWWLFVTFVDIISLAFKLVKNYDSMMNLWILLLEEENIVDVVSLPMLLVLCFNALPNACVKEQSEIEQRLLHKEFESSTLGDESEEAFVKAGLWSKLTFRWLNPIFEIGRIQKLEHVHVPSVPHSETAASASSMLEESIRKQKLQGGSLTKAIVHSVWKSLALNAVLAGVNTIASYIGPLLISNFVNFLLSNDDNSNIKYGMILAFIFFLSKTVESLSQRQWYFGAQRIGIQVRAALMALVYSKSLTIKCGGPTHGKIINLINVDVERIGDFCWYVHGVWLLPVQIILALAILYINLGYTPSIAALVVTILVMVCNTPLANMQEGLHSKIMEAKDSRIKMTSETMKNIRILKLHSWESTFLQKLFQLRDTERKWLHKYLYLCSAVATLFWASPTLVSVFTFGACILVKTELTAATVLSALATFRILQEPIYNLPELISMITQTKVSVDRIQDFITEEDQNQFMNKHASKTSTIAIEIKAGEYAWEENDQYLKKPTIHIVEKLLIKKGQKVAVCGPVGSGKSSLLCSMLGEISLVSGAATKVYGTRSYVPQSPWIQSGTIRDNILFGKQMNKDLYEKVVDGCALLQDINLWSDGDLTMVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGSHLFKECLMKLLYDKTVVYATHQMEFLEAADLILVMKDGKIVESGRYKDLIACPYSEFVQQMAAHEETICQIPCRKDDSVCCRPCQKNPIEIAEENIQEIMMDWKRTREEEAMTGGVKWSVYSTFVTLAYRGALVPVILLCQVLFQVMQMGSNYWMSWATEEKGRVDNARLMGIFALLSGGSSVFILGRTVLMATVAVETAQRLFQGMITSVFRAPVSFFDTTPSSRILSRSSTDQSTVDTDIPYRLAGLVFALIQLLSIIVLMSQAAWQVILLFFVVLAISVWYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRCFNQEKIFLTKVMALIDDYSRVAFHNFATMEWLSVRINFLFNLVFYFVLIILVSLPRSAIDPSLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSNIPSEAPLIIEDCRPEPEWPKEGIIEFLNLHIQYDPTGPMVLKGVTCIFPGQKKIAVVGRTGSGKSTLVQALFRVVEPLEGCILIDGVNISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHTDQELWEVLSKCHLAEIVQQDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRKILVLDEATASIDTATDNLIQKTIREETSGCTVITVAHRIPTVIDNDLVLVLNEGTIAEYDKPSQLLQDSSSSFSKLVSEFLRRSSQSNC* 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1329 1447 Gene3D - 604 830 IPR027417 -
Tpr3g1329 1447 SMART AAA_5 618 792 IPR003593 -
Tpr3g1329 1447 SMART AAA_5 1228 1421 IPR003593 -
Tpr3g1329 1447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1194 1428 IPR027417 -
Tpr3g1329 1447 SUPERFAMILY ABC transporter transmembrane region 267 567 IPR036640 GO:0005524|GO:0016021
Tpr3g1329 1447 Coils Coil 842 862 - -
Tpr3g1329 1447 CDD ABC_6TM_ABCC_D2 887 1177 IPR044726 GO:0140359
Tpr3g1329 1447 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 589 815 IPR003439 GO:0005524
Tpr3g1329 1447 SUPERFAMILY ABC transporter transmembrane region 888 1182 IPR036640 GO:0005524|GO:0016021
Tpr3g1329 1447 ProSitePatterns ABC transporters family signature. 717 731 IPR017871 GO:0005524
Tpr3g1329 1447 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 108 1445 - -
Tpr3g1329 1447 Gene3D ABC transporter type 1, transmembrane domain 854 1183 IPR036640 GO:0005524|GO:0016021
Tpr3g1329 1447 Gene3D ABC transporter type 1, transmembrane domain 260 572 IPR036640 GO:0005524|GO:0016021
Tpr3g1329 1447 Gene3D - 1185 1438 IPR027417 -
Tpr3g1329 1447 CDD ABCC_MRP_domain1 587 792 - -
Tpr3g1329 1447 CDD ABC_6TM_ABCC_D1 275 562 IPR044746 GO:0140359
Tpr3g1329 1447 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1202 1436 IPR003439 GO:0005524
Tpr3g1329 1447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 613 805 IPR027417 -
Tpr3g1329 1447 PANTHER OS01G0902100 PROTEIN 108 1445 - -
Tpr3g1329 1447 CDD ABCC_MRP_domain2 1200 1420 - -
Tpr3g1329 1447 Pfam ABC transporter transmembrane region 275 541 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g1329 1447 Pfam ABC transporter transmembrane region 890 1129 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g1329 1447 Pfam ABC transporter 1219 1367 IPR003439 GO:0005524
Tpr3g1329 1447 Pfam ABC transporter 615 744 IPR003439 GO:0005524
Tpr3g1329 1447 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 274 554 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g1329 1447 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 889 1165 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1329 Tpr-Chr3 11770092 11776313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1329 602 842 Calmodulin-binding Proteins AT2G36910 28.679 5.02e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1329 - - gmx:100809063 2269.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1329 3 11770092 11776313 Tpr3g1329 3 11770092 11776313 ECH