Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1299 ATGACAATATCTATTGGTTTGGAATACAATATTAATGATTTGTATCAAGAAGCTCAAAGGAGATGGTTGAAGCCTGCAGAAGTCATGTACATTTTACAGAATCATGAACAGTATCAGTTCACTCAAGAGCCCCCGCAACAGCCCACAAGTGGTTCCCTGTTTCTGTTTAACAGAAGAGTACTGCGTTTCTTCCGTAGAGATGGTCATGCCTGGCGGAAGAAAAGAGATGGAAGAGCTGTAGGAGAAGCCCACGAACGGCTGAAGGTTGGAAATGTTGAAGCCATAAATTGTTACTATGCACATGGAGAACAGAACCCTACTTTCCAGAGGCGGAGCTATTGGATGTTGGACCCGGCATTTGACCATATTGTTCTCGTGCATTACAGAGACACAAGTGAGGGAAGGCTCAGTTCTGGACCTGGTACACAACTGTCACCGGGTTCTTCTTCTGCATACAGTCAGAGTCCTAGCTCATATAGTAATCATAACCCGGGGTCAACGTCCATTATTGATGATTCATATGAACCTAATCAGAGTTTCTATAGTCCTGTATCTGCTGAAGTTACCTCTGCTAACAGTGGAATGAGTCACTCGGAAGGAACAGAAGCAGAATCTGGAACCTCAGCTGACCTTAAGATTACTCAAGTTTTGCGCCGATTGGAGGTTCAGTTAAGTTTGAATGAGGACAACTTCGAAGAAATTGCTCCCTTCCGCAATGAGCATGAAGTTACCCATGATTCAATAGCACAAAACCATCAAGCGGTGATCTGCAAGCAAGAGGAGTCTGCTGCTCTGTCTGGACCGGATGATCAAGGGCTATTATATGATGGATATAACGGAAGGCAAGGTGATAATGGTGAAAGTTATCGTGAATTACTAGACCATGATTTCCCTGATGGAAATGAAAAGGCTTTATCTTGGAAAAATGTATACATTCCAGCTGGAAATCAGGAGAGTTCACCATCTTCTTCAATAAGGGAACCAGTTACCAACCTGGAAGACGATTGCTGGGCAAATTTCAACACAAATAATGCTGGAAACTCTGTTTTCTCACTACCTCAAGCTGTTGGTGGAGTCACACTTCCTCCATATTCTTCTATGGTAGAAACACAAGAAGCTAGTTCTGGCTACTATGCGACATTGTTTAACCCAAGCCAAATCGGAGCATCTCATGATGCAGGTTCAAGCTTAACTGTTTCACAAAAACAAAAATTTACCATAAAGGCAGTCTCACCGGGATGGGGTTATGCCTCTGAGACTACAAAGGTTTACATTATTGGGTCTTTTCTCTGTCATCCTTCCAATTCTGCTTGGGCCTGTATGCTTGGTGATGTTGAAGTTCCTGTGGAGATAATTCAGGATGGTGTAATGTGTTGTGAAGTTCCATCTCATATTCCTGGAAAGGTTACTCTGTGCATTACATCTGGAAACCGGGAGTCGTGCAGTGAAGTAAGAGAATTTGAGTATCGTGATAAGACTGAGAGTTACACCCACTATACTCCATCTGAAACTGAAGCCAGCAGAACTCCAGAAGAGCTGTTATTACTTGTTAGATTTGGGCAAATGCTCCTTTCTGCGTCATCTGTAAGTAATGATAACAACGAATCGGGAATTTTCATAAAACAGAAAGCTGATGATAATTCATGGAGCCATATTATAGAGGCTCTTCTATTTGGCAGTGGAACTTCTTCTGGTACTATCAATTGGCTTCTTGAAGAGCTTCTAAAGGATAAGCTACAGGTGTGGCTTACATACAGATCCCGCGAAATAGATGAAGAGACGGGCTGTTCTTTGTCCAAGAAAGAGCAAGGGATTATTCACATGGTTGCTGGGTTGGGTTTTGAGTGGGCCTTGAACCCTATTCTCAGTTGTGGTGTGAATATTAATTTCCGTGACATCAACGGGTGGACTGCCCTTCATTGGGCTGCACGTTTTGGAAGAGAAAAAATGGTTGCGTCGCTTATAGCTTCTGGTGCATCTGCTGGAGCTGTGACAGATCCAAGTGCACAAGATCCAACTGGTAAAACTGCAGCATCAATTGCATCTAGCAGTGGGCATAAGGGACTGGCAGGGTATCTTTCAGAGGTAGCTCTAACAAGCCATCTGTCATCGCTTACACTGAAAGAGAGTGAGCTGTCTAAAAGTTCTGCGGAGCTTCAAGCAGATTTAACTGTTAGTAATGTCTCCAAGGAAAATATTGCTTTCAGTGAGGATCGGGCCTCACTTAAAGATTCTTTAGCTGCTGTCAGAAATACAACTCAGGCAGCTGCACGGATACAAGCTGCTTTTCGTTCACATTCATTTAGAAAACGGAGAGCAAAAGAAACAAATGCGGTTATGAGTGGACATGATATCAGTGCAAGTAGCTTTGGTGACATGCCAGAGCTTTATGCTATGTCAAAACTTGCCTTTCGGAACTCGCGTGAAAGTAATTCAGCTGCGTTATCAATTCAGAAGAAATATCGAGGTTGGAAAGGTCGCAAAGATTTTCTATCATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAAGTTAGGAAGCATTACAAAGTATTATGGGCAGTTGGAATCTTGGACAAGGTTGTGCTAAGATGGCGTAGAAAAGGAGTTGGTTTACGAGGTTTCAAACCAGAGGTGGCGGTTAATGAAAACGAAGATGAAGATGAAGATGAAGATATTCTCAAGGTGTTCCGAAAACAGAAAGTGGATGGCGAAATTGACAAGGCTGTCTCAAGGGTGCTGTCCATGGTCAAATCTCCTGATGCTCGTGAGCAATATCATCGCATGCTTGAGAAGTATCGTCAAGCCAAGGCCGAACTTGCACAAACGAGTGAAGAAAAATCGTTAACAACTTCTATAGAAGATTACTTGAACATGGATGATGATGATTTTTATTAA 2910 0.4282 MTISIGLEYNINDLYQEAQRRWLKPAEVMYILQNHEQYQFTQEPPQQPTSGSLFLFNRRVLRFFRRDGHAWRKKRDGRAVGEAHERLKVGNVEAINCYYAHGEQNPTFQRRSYWMLDPAFDHIVLVHYRDTSEGRLSSGPGTQLSPGSSSAYSQSPSSYSNHNPGSTSIIDDSYEPNQSFYSPVSAEVTSANSGMSHSEGTEAESGTSADLKITQVLRRLEVQLSLNEDNFEEIAPFRNEHEVTHDSIAQNHQAVICKQEESAALSGPDDQGLLYDGYNGRQGDNGESYRELLDHDFPDGNEKALSWKNVYIPAGNQESSPSSSIREPVTNLEDDCWANFNTNNAGNSVFSLPQAVGGVTLPPYSSMVETQEASSGYYATLFNPSQIGASHDAGSSLTVSQKQKFTIKAVSPGWGYASETTKVYIIGSFLCHPSNSAWACMLGDVEVPVEIIQDGVMCCEVPSHIPGKVTLCITSGNRESCSEVREFEYRDKTESYTHYTPSETEASRTPEELLLLVRFGQMLLSASSVSNDNNESGIFIKQKADDNSWSHIIEALLFGSGTSSGTINWLLEELLKDKLQVWLTYRSREIDEETGCSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPSAQDPTGKTAASIASSSGHKGLAGYLSEVALTSHLSSLTLKESELSKSSAELQADLTVSNVSKENIAFSEDRASLKDSLAAVRNTTQAAARIQAAFRSHSFRKRRAKETNAVMSGHDISASSFGDMPELYAMSKLAFRNSRESNSAALSIQKKYRGWKGRKDFLSLRQKVVKIQAHVRGYQVRKHYKVLWAVGILDKVVLRWRRKGVGLRGFKPEVAVNENEDEDEDEDILKVFRKQKVDGEIDKAVSRVLSMVKSPDAREQYHRMLEKYRQAKAELAQTSEEKSLTTSIEDYLNMDDDDFY* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1299 969 ProSiteProfiles Ankyrin repeat region circular profile. 634 660 - -
Tpr3g1299 969 ProSiteProfiles Ankyrin repeat profile. 634 666 IPR002110 GO:0005515
Tpr3g1299 969 Coils Coil 927 950 - -
Tpr3g1299 969 ProSiteProfiles CG-1 DNA-binding domain profile. 11 137 IPR005559 GO:0003677
Tpr3g1299 969 ProSiteProfiles IQ motif profile. 752 781 IPR000048 GO:0005515
Tpr3g1299 969 Pfam IPT/TIG domain 406 489 IPR002909 -
Tpr3g1299 969 SMART ANK_2a 634 663 IPR002110 GO:0005515
Tpr3g1299 969 Gene3D - 809 858 - -
Tpr3g1299 969 MobiDBLite consensus disorder prediction 135 164 - -
Tpr3g1299 969 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 799 857 IPR027417 -
Tpr3g1299 969 SUPERFAMILY Ankyrin repeat 602 695 IPR036770 -
Tpr3g1299 969 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 7 966 - -
Tpr3g1299 969 CDD IPT 406 491 - -
Tpr3g1299 969 MobiDBLite consensus disorder prediction 134 164 - -
Tpr3g1299 969 Gene3D - 518 699 IPR036770 -
Tpr3g1299 969 SMART CG_1_2 14 132 IPR005559 GO:0003677
Tpr3g1299 969 Pfam Ankyrin repeats (3 copies) 616 694 IPR002110 GO:0005515
Tpr3g1299 969 SMART iq_5 809 831 IPR000048 GO:0005515
Tpr3g1299 969 SMART iq_5 832 854 IPR000048 GO:0005515
Tpr3g1299 969 SMART iq_5 751 773 IPR000048 GO:0005515
Tpr3g1299 969 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 7 966 - -
Tpr3g1299 969 SUPERFAMILY E set domains 406 490 IPR014756 -
Tpr3g1299 969 Pfam CG-1 domain 17 130 IPR005559 GO:0003677
Tpr3g1299 969 Pfam IQ calmodulin-binding motif 812 830 IPR000048 GO:0005515
Tpr3g1299 969 Pfam IQ calmodulin-binding motif 835 854 IPR000048 GO:0005515
Tpr3g1299 969 Gene3D Immunoglobulins 399 495 IPR013783 -
Tpr3g1299 969 ProSiteProfiles IQ motif profile. 833 858 IPR000048 GO:0005515
Tpr3g1299 969 ProSiteProfiles IQ motif profile. 810 839 IPR000048 GO:0005515
Tpr3g1299 969 MobiDBLite consensus disorder prediction 187 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1299 Tpr-Chr3 11473714 11481834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1299 7 969 CAMTA Transcription Factor Family AT1G67310 50.990 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Tpr3g1299 CG-1 1.4e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1299 K21596 - gmx:100786880 1428.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1299 3 11473714 11481834 Tpr3g1299 3 11473714 11481834 ECH
Tpr2g4650 2 51767419 51777783 Tpr3g1299 3 11473714 11481834 PCT