Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1292 ATGGAAATTGTTCGACCACAGAGTCACCGGAACTTGTTTTCCTCTAACGACGCCGTTTCTGTTCCAACTATTCCCCTCTATCGCTCTGCTCCGCCTCTCGAAGTCCGACTTGAAGATTTCGAGTCCTTCGCCATCGATCGCCTCCGAGTTCTGAAAGGGATTTCTGATGGTTTGTCACGGGGGAAGAAACCGGATGAAATGGAAAAATTGGTAGAAGAATCGTGGAAAGTGCACATGAGACATCAGCATGCTTCTGAAGTTCTGAACAAGGATATTATATCTCATTTTGTTTTACGTTTGGTCTATTGCAGAACGGAAGACTTGAGGAAATGGTTTCTCTCAATGGAATGTGCGCTTTTTCGCTACCGTTTTCGCTTTCTAACTACTGAAGCTCAGAGGGCAATCATGGATGAATTTGACCTTACTTGCAAGGCTGTTAACAATGTGGAATTTGAGAGCATAAAAGAGAAATTAGGACAAGTTGCACGTTCCATGGGTCAGCTTTCACCCACAGTCGATACTATATTTTACAAGGTACCATTTGAAGAAGTTCCAGAACTTGTAGCTGGACGTAAAGTGTTTATAAGCCAAGGATATGCTTATGTTGCAATGAATCAGGTTGTTTCACTTGTAGCCACTCTATTCCGCAGTCAGCTGTCAAAGACACTCATCCTTACAAACAGAAAATGGACAGCTTCAATCAGAGATCAAGAGAAACATAGGTTGACTCCTATTGTGGAAGCCTTGAGCTCAAGTTATCTGGGTCCTGATTTTTCTCAGCCAAGAGAATATGCTGAGATATCTTTGAAGGACATTGATCAAGTTGCCAAGACCTCGTTTCCTTTGTGCATGCGTCACCTGTTTGATAAGCTGAAAGAGGACCATCATTTAAAGCATGGTGGGAGGATGCAACTAGGCCTCTTTCTCAAGGGTGTTGGTTTGAACCTGGATGATGCACTTGCGTTTTGGAGAGCTGAGTTCTCTAAGAAGGTTGGTTTGGAGAAGTTCGAGAAAGAATATTCATATAACATACGACATAATTATGGAAAAGAAGGGAAGAGAACTGATTATACTCCCTATTCTTGTCAAAAGGTTATTTCATCAACTCCTGGTGCTGGAGATCAGCATGGTTGCCCCTATCGACAGTTCAGTGAGGAGAATCTAAGAGCTGCTCTCAGCAGAATGGGGGTGAACAGTCGAGCAATGGAAGATGTCATGGACAAAGTGCGAAATAGACATTATCAGTTAGCATGTACCTTGACATTTGAAGCTCTTCACGGCGTGGCATGTGATGCAGGAATTAACCATCCAAATCAATATTTCAGTGACAGTCAAAAGATATTGCAACCAAAGAAGGACTCTTCAGCCTAA 1371 0.4267 MEIVRPQSHRNLFSSNDAVSVPTIPLYRSAPPLEVRLEDFESFAIDRLRVLKGISDGLSRGKKPDEMEKLVEESWKVHMRHQHASEVLNKDIISHFVLRLVYCRTEDLRKWFLSMECALFRYRFRFLTTEAQRAIMDEFDLTCKAVNNVEFESIKEKLGQVARSMGQLSPTVDTIFYKVPFEEVPELVAGRKVFISQGYAYVAMNQVVSLVATLFRSQLSKTLILTNRKWTASIRDQEKHRLTPIVEALSSSYLGPDFSQPREYAEISLKDIDQVAKTSFPLCMRHLFDKLKEDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRAEFSKKVGLEKFEKEYSYNIRHNYGKEGKRTDYTPYSCQKVISSTPGAGDQHGCPYRQFSEENLRAALSRMGVNSRAMEDVMDKVRNRHYQLACTLTFEALHGVACDAGINHPNQYFSDSQKILQPKKDSSA* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1292 456 PANTHER DNA PRIMASE LARGE SUBUNIT 1 452 - -
Tpr3g1292 456 CDD PriL_PriS_Eukaryotic 26 444 IPR016558 -
Tpr3g1292 456 Gene3D - 5 249 - -
Tpr3g1292 456 Pfam Eukaryotic and archaeal DNA primase, large subunit 176 441 IPR007238 GO:0006269
Tpr3g1292 456 PANTHER DNA PRIMASE LARGE SUBUNIT 1 452 IPR007238 GO:0006269
Tpr3g1292 456 PIRSF DNA_primase_large 2 456 IPR016558 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1292 1 455 Core DNA Replication Machinery Family AT1G67320 66.395 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1292 K02685 - gmx:100816023 824.698