Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr3g1278 | ATGGAGGAGGATTTCGATTTGCAGCCAACAGAGAATGAAATGGAAATGCCTGAGGAAGAAGAAGAGATGATGAGTCCGATCCACAAGGTTGGTGAAGAGAAGGAGATTGGTAACAATGGTTTGAAGAAGAAGCTTGTTAAGGAAGGTGAAGGATGGGAAACTCCTGATATTGGAGATCAGGTTGAAGTGCATTATACCGGAACTTTGCTTGAAGGAACCAAATTTGATTCCAGCCGCGATAGGGCCACCACTTTCAAGTTTAAACTTGGTCAAGGGCAAGTGATCAAAGGATGGGATGAAGGTATCAAAACCATGAAGAAGGGTGAAAATGCTATTTTCACAATACCCCCAGAATTGGCTTATGGAGAGTCTGGGTCACCTCCCACTATTCCACCAAATGCAACTCTTCAGTTTGATGTGGAGTTGCTGTCTTGGACTAGTGTCAAGGACATTACCAAGGATGGTGGGATATTGAAGAACATTGTAACTAAAGGGGAGAAATGGGACAATCCTAAGGATCTTGATGAAGTATTTGTTAAGTATGAAGCTTGTCTTGAAGATGGGACGATTATTTCAACATCTGACGGGGTCGAGTTCACTGTTGAAGAGGGTTATTTCTGTCCTGCTTTGGCTAAGGCTGTGAAAACAATGAAGAAGGGAGAAAAAGTTCTCTTGAATGTTAAGCCCGAATATGCATTTGGTGAGAGTGGAAAACCTTCATCAGGAGATGATGGTGCTGTACCGCCAAATGCTTCGCTCCAAATCGATCTTGAGTTAGTCTCGTGGAAGACTGTATCTGACATTACTAAGGATAGGAAGGTCCTTAAGAAGATTTTGAAAGAAGGAGAGGGATATGAACGACCAAATGATGGAGCTGTGGTTCAAGTGAAACTTATTGGGAAGCTGCAAGATGAGACTGTCTTCCTTAAGAAGGGTCATGACGATGATCAGCCATTTGAGTTCAGAATTGATGAAGAGCAAGTAATTGATGGACTTGATAGAGCTGTGAAGAACATGAAGAAAGGGGAAATTGCATTGGTGATCATACAGCCTGAATATGCTTTTGGCCAATCTGCCTCCCCTCATGAATTGGCTACTGTTCCTCCTAATTCCACAGTTTACTATGAAGTTGAGCTGATTTCCTTTGTAAAGGAAAAGGAATCATGGGATCTGAATACAGAAGAGAAGATAGAGGCAGCTGGAAAGAAAAAGGAAGAAGGGAATGCATTGTTCAAAGCTGGTAAACATGAAAGAGCATCAAAGAGATATGAGAAGGCCATAAAGTATATCGAGTACGATTCTGCCTTCGGTGATAAGGAGAAACAGCAGGCCAAAGCATTGAAAATTACATGCAATCTTAACGACGCGGCCTGTAAGTTGAAACTCAAGGACTACAAACAGGCAGAAAAGTTGTGCACAAAGGTGTTAGAACTTGATAGTAGGAATGTAAAAGCACTATACCGGAGGGCACAAGCATATATTAATCTTGTGGATTTGGATTTGGCTGAAATGGATATCAAGAAAGCCCTTGAAATTGATCCAGATAACAGGGATGTGAAAATTGAGTACAAAATTTTGAAGGACAAAGTGAGAGAATACAACAAGAAGGATGCACAATTCTATGGTAACATATTTGCCAAAATGAATAAAGTAGATCAATCAAGAACTGCTGCAGCAAACCAGGAATCAGTGCCGATGGCTGTGGATAGTAAAGCTTAA | 1719 | 0.4124 | MEEDFDLQPTENEMEMPEEEEEMMSPIHKVGEEKEIGNNGLKKKLVKEGEGWETPDIGDQVEVHYTGTLLEGTKFDSSRDRATTFKFKLGQGQVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDITKDGGILKNIVTKGEKWDNPKDLDEVFVKYEACLEDGTIISTSDGVEFTVEEGYFCPALAKAVKTMKKGEKVLLNVKPEYAFGESGKPSSGDDGAVPPNASLQIDLELVSWKTVSDITKDRKVLKKILKEGEGYERPNDGAVVQVKLIGKLQDETVFLKKGHDDDQPFEFRIDEEQVIDGLDRAVKNMKKGEIALVIIQPEYAFGQSASPHELATVPPNSTVYYEVELISFVKEKESWDLNTEEKIEAAGKKKEEGNALFKAGKHERASKRYEKAIKYIEYDSAFGDKEKQQAKALKITCNLNDAACKLKLKDYKQAEKLCTKVLELDSRNVKALYRRAQAYINLVDLDLAEMDIKKALEIDPDNRDVKIEYKILKDKVREYNKKDAQFYGNIFAKMNKVDQSRTAAANQESVPMAVDSKA* | 573 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr3g1278 | 572 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 171 | 260 | IPR001179 | GO:0003755 | |
| Tpr3g1278 | 572 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 285 | 380 | IPR001179 | GO:0003755 | |
| Tpr3g1278 | 572 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 53 | 143 | IPR001179 | GO:0003755 | |
| Tpr3g1278 | 572 | SUPERFAMILY | FKBP-like | 150 | 266 | - | - | |
| Tpr3g1278 | 572 | Pfam | Tetratricopeptide repeat | 484 | 516 | IPR019734 | GO:0005515 | |
| Tpr3g1278 | 572 | Coils | Coil | 516 | 536 | - | - | |
| Tpr3g1278 | 572 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Tpr3g1278 | 572 | Gene3D | - | 148 | 263 | IPR046357 | GO:0003755 | |
| Tpr3g1278 | 572 | ProSiteProfiles | TPR repeat profile. | 483 | 516 | IPR019734 | GO:0005515 | |
| Tpr3g1278 | 572 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 272 | 382 | - | - | |
| Tpr3g1278 | 572 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 270 | - | - | |
| Tpr3g1278 | 572 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 382 | 553 | - | - | |
| Tpr3g1278 | 572 | SUPERFAMILY | FKBP-like | 33 | 153 | - | - | |
| Tpr3g1278 | 572 | SUPERFAMILY | FKBP-like | 265 | 400 | - | - | |
| Tpr3g1278 | 572 | SMART | tpr_5 | 483 | 516 | IPR019734 | GO:0005515 | |
| Tpr3g1278 | 572 | SMART | tpr_5 | 449 | 482 | IPR019734 | GO:0005515 | |
| Tpr3g1278 | 572 | SMART | tpr_5 | 400 | 433 | IPR019734 | GO:0005515 | |
| Tpr3g1278 | 572 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Tpr3g1278 | 572 | Gene3D | - | 264 | 385 | IPR046357 | GO:0003755 | |
| Tpr3g1278 | 572 | SUPERFAMILY | TPR-like | 389 | 549 | IPR011990 | GO:0005515 | |
| Tpr3g1278 | 572 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 291 | 383 | IPR001179 | GO:0003755 | |
| Tpr3g1278 | 572 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 174 | 263 | IPR001179 | GO:0003755 | |
| Tpr3g1278 | 572 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 58 | 146 | IPR001179 | GO:0003755 | |
| Tpr3g1278 | 572 | Gene3D | - | 3 | 147 | IPR046357 | GO:0003755 | |
| Tpr3g1278 | 572 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 270 | - | - | |
| Tpr3g1278 | 572 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 382 | 553 | - | - | |
| Tpr3g1278 | 572 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 272 | 382 | - | - | |
| Tpr3g1278 | 572 | Gene3D | Tetratricopeptide repeat domain | 386 | 543 | IPR011990 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr3g1278 | Tpr-Chr3 | 11339218 | 11342687 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tpr3g1278 | 1 | 572 | Calmodulin-binding Proteins | AT5G48570 | 71.478 | 0.0 | 841 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr3g1278 | K09571 | - | gmx:100810243 | 971.459 |