Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1277 ATGTCTGTCCCAAAGCATGATGTGTTCCTGAGCTTTAGAGGAGAGGACACTCGTGACAACTTCACTAGTCATCTTTATGCAGAATTACGTAGGAAAAACATTGAAACATTCATAGATAATAGACTTGACAGAGGCGAAGAGATTTCACCAGCACTGTACAGAGCAATAGAAGAATCAAAGATTTATGTGATCATTTTGTCCGAACACTATGCTTCTTCCAGTTGGTGCTTAGATGAACTCACAGAAATACTGAAATGTAAGGAGAGATATGGAAGGGAAGTAATACCGGTGTTCTATAAGGTGGATCCGTCAAATGTTAGGCATCAGGTACAGAGTTATGCAGACGATTTAGGTAAGCATCATCAACGATTTGGTGGTAAAGTGGACGCGTGGAAGGCTGCTCTAAACCAAGTAGCTGGATTCTCTGGTTGGGATTCACAAGTAACCAGACCAGATAGCACACTTGTTACTGAGATTGTGAAAGATATTTTGAAAAAAATGAATAGTTGTTTCATAAGCGAGTATGAAGGAATGCCGGGAATTGACATGCATATTGAACAGATACAATCCTTGTTGCTCCTCGAGCTGCCGACTGTTCGTATCACAGGAATATGGGGCATGGGAGGGATAGGCAAAACAACAATTGCTAGTGCATTGTTTGAAAAACTCGCTACTCAGTTCAGTTCCAAAATCATTATTCCAAATGTTCAACAAGAAATAGAAAGATTTGGACTAAACCATGTAAAAAGAAAATACTTATCTACACTTCTAGGGGAGGACATTACATCCTTTGAATACAATTTTTCATTTGATCCAAGGCTGAAACGAATTAAGGTTCTTCTTGTTTTCGATGACGTGAAAGATTCTGATCAACTTAAAGATTTAATTGGGATGCATAATAACTTTGGTCCGGGGAGTAGAATCATTGTGACTAGCAGAAACAAGCAAGTGCTCGAGAATGCCAATGCGAATAATATATACCAAGTTAGGGAAATGGATTATCAAGATTCTGTACAACTCTTCTGTTTATTTGCCTTTAAACAAAAACAACCAAAAAGCTCTTATATGAGCTTAACAAATCAGGTTTTAGATTATGCTAAAGGACTTCCATTAGCTCTCAAAGTTTTGGGCTCATTGCTTTATGGTAAAACAAAGGAAGTATGGGAAAGTCAGCTGCAAAAGCTTAAAAAGTTTCCCGATCTTAAAATTTTTAGATTGTTGGAGTTGACTTATCACGGACTTGACGAAGAACAAAAAGATATATTTCTTGATATAGCTTGCTTTTATAGAGGAGATTTTGAGAAAGTTGTAGAACAAACATTGAGTTATTGTGGTTTCTCTGCTTGCAATGGAATGGATGTACTTAAAGATAGGTGCCTTATATCTATTTCAGAAGGTAGAGTTCAGATGCACGATCTAATACAAGAAATGGGGCATGAAATCGTTCGGCTTCAATGTGTCAATAATCCTGAAAAACGTAGTCGATTATGGAAGCCTAACGATGTTTTTGATGTTTTAAATAAGAACAAGGGAAAGGGGACAGAGGCGATCCAATGTATATTTCAAGAAATAGAGGAAATAAAGAAGGTTCAACTTCATGATGATACATTCAAGAAAATGCATAATCTTAGAATGATCAATTTCTATAAGTACCAGAATGAGTTAACAATACCTGTGAGTTGGGTCTTCATGCGGAACTGGAAGGACATTCTAAAAAAAAATAATGTAATTCATGCATTTCCTAAGAGTTTTCCAGATCATTTAAAATTTCTTTGTTGGTATGAATTCCCTCAAAGATCTTTGCCTCAAGACTTTTGCCCAAGAAATCTTGTTATACTTGAAATGACATATAGCAATCTTAGACAACTTTGGAAGGAGGATCAGGCTTTACCAAATTTGAAAAGGCTTGACCTTAGCAATTCTGAGGAGTTGATAAGACTACCAGACCTCTCTTTGTCTCCAAATATTGAAGTAGTAATTCTTAGTGGCTGTACAAGTTTGTTACAAGTTTACTCCTCTAGCTTCCTCGACAACCTTAACTGGTTATGTTTAAATGATTGTTTCAGGCTCCAGAGTTTAGATATTCGTAGCAATATTCTGTCGAGATCATCTGGATTAGTTGCTCTCCGTGCTTGTTACAAACTTGAAACACTTTTAATCACCGGTAGGATAGATAATCAAGTGGTTCAATCATACATAACTTATCATTTCAAATCCGTACGTATTTTTAATGATAAAATGTATCTATTGCTGAATAATGAGGGGGAGTACATGATTCAGGAAACCAATTCAGATACTCTTATGAGTATCAATGAGATTTGTTGGTTAGATATTTCATATTGTCACTCCATAACATGCTTGCCGGATGAACTTTTAAATTCGAAGTTTCTAACAAGACTAAGTCTCAGTCATTGTTCAGAGTTGGAGGAGTTACCTGAAATCAAAGAGACTACAGAAAATCTAAAAGTGCTCGTCTTAGACTATACAGCAATAAAAGAGCTACCTTCATCTCTACATCGTTTGGCCGGGCTTGAAGAATTGAGCTTGAAAAGTTGCAAAAAGCTTAAGACTATTCCATCTTCTGTTGGAAATCTCAGTAAACTTCGCAAGTTAAACCTTGCCGAATGTGCATCACTTGAAACTTTTCCAAGAAGAATTTTCAAATTAAAGTTGACAAAACTCGATTTCCATGGTTGCTCAATGCTTAGGACCTTTCCAGATATCTTGGAGTCTGCAGAAAATTTTACTCACATTAACCTAACAAAAACAGCAATAAAAGAACTACCTTCATCACTGCACCATTTGTTCGGGCTTAAAGAATTGAACTTGCAAAGTTGCACAAAGCTTAAGACTCTCCCATCTTCTATTGGAAATCTCAGTAAACTCCGCAAGTTAGACCTTACCTACTGTGAATCACTTGAAACTTTTCCGAGCAGCATTTTCAAATTGAAGTTGACAGAACTTGATTTCGAGGGTTGCTCAATGCTTAGGACCTTCCCAGAGATCCCAAATAACATTGGCCGCTTGTCATCCTTGACAGAACTTTCACTGCAAGGAAGCAATATTGTGAACCTTCCCGAGAGTATGGCTAATCTCTCAGGTTTGCAATCACTTGATTTAACTGATTGCAAACAGCTTGAATGTATCCCAAAGCTTCCACCGAATCTAGTCATGTTGTTGGCATTTGACTGTCCATCCATTAAGAGAGTGGTGTTGAATTCAAAGCTTATACTCATGTCTAATTCGAAAGATGTTATCTTCGACATTTATCTCACCAATAGTCAAGAACTTGACGTGACTTTTTGGAGTAAAATTGGAGTCGAAGCATGGATTAAAATCACTGATGATGCATATAGGCCAGTGTTCTTCTGGTTTCCAAGAAGTGCAATTCCTGATTGGTTCCCTTACCGTTGCCAGGGACATTCGATAACTGTGAAAGAAGTTGATCGATACGTGTGCAATGAAAATATGCTCATTGGTTTCACTCTGTGTGTTGTTTTGGGACAGAAAGAGATAAAAACAGAATATAGTGCCTTTAGATACAAGTTCACATTTGAATCTGATGGTCAATCATATATTCAATACCACAATGCGCCTAGAGACTATATCTTACGGAAGGGTAAAAATAGGTTTTTCAACAACCAAGATCATCATCATCTGCACACATTCATGTGGAAGCATAAATTGGACTTGGCAAACATTGATAACTGGTTCTTTCATGCCTACAACTTCACTTTTGAGATCATAGATGAGCCTGAAATTGATCATGCAAGGCATAAAATATCCTTCCCGGTGAAAGAATGTGGAATATGTCCTCTGTATATTAAAAAAAATGATGAATGTAATTGGCATTGA 3855 0.3696 MSVPKHDVFLSFRGEDTRDNFTSHLYAELRRKNIETFIDNRLDRGEEISPALYRAIEESKIYVIILSEHYASSSWCLDELTEILKCKERYGREVIPVFYKVDPSNVRHQVQSYADDLGKHHQRFGGKVDAWKAALNQVAGFSGWDSQVTRPDSTLVTEIVKDILKKMNSCFISEYEGMPGIDMHIEQIQSLLLLELPTVRITGIWGMGGIGKTTIASALFEKLATQFSSKIIIPNVQQEIERFGLNHVKRKYLSTLLGEDITSFEYNFSFDPRLKRIKVLLVFDDVKDSDQLKDLIGMHNNFGPGSRIIVTSRNKQVLENANANNIYQVREMDYQDSVQLFCLFAFKQKQPKSSYMSLTNQVLDYAKGLPLALKVLGSLLYGKTKEVWESQLQKLKKFPDLKIFRLLELTYHGLDEEQKDIFLDIACFYRGDFEKVVEQTLSYCGFSACNGMDVLKDRCLISISEGRVQMHDLIQEMGHEIVRLQCVNNPEKRSRLWKPNDVFDVLNKNKGKGTEAIQCIFQEIEEIKKVQLHDDTFKKMHNLRMINFYKYQNELTIPVSWVFMRNWKDILKKNNVIHAFPKSFPDHLKFLCWYEFPQRSLPQDFCPRNLVILEMTYSNLRQLWKEDQALPNLKRLDLSNSEELIRLPDLSLSPNIEVVILSGCTSLLQVYSSSFLDNLNWLCLNDCFRLQSLDIRSNILSRSSGLVALRACYKLETLLITGRIDNQVVQSYITYHFKSVRIFNDKMYLLLNNEGEYMIQETNSDTLMSINEICWLDISYCHSITCLPDELLNSKFLTRLSLSHCSELEELPEIKETTENLKVLVLDYTAIKELPSSLHRLAGLEELSLKSCKKLKTIPSSVGNLSKLRKLNLAECASLETFPRRIFKLKLTKLDFHGCSMLRTFPDILESAENFTHINLTKTAIKELPSSLHHLFGLKELNLQSCTKLKTLPSSIGNLSKLRKLDLTYCESLETFPSSIFKLKLTELDFEGCSMLRTFPEIPNNIGRLSSLTELSLQGSNIVNLPESMANLSGLQSLDLTDCKQLECIPKLPPNLVMLLAFDCPSIKRVVLNSKLILMSNSKDVIFDIYLTNSQELDVTFWSKIGVEAWIKITDDAYRPVFFWFPRSAIPDWFPYRCQGHSITVKEVDRYVCNENMLIGFTLCVVLGQKEIKTEYSAFRYKFTFESDGQSYIQYHNAPRDYILRKGKNRFFNNQDHHHLHTFMWKHKLDLANIDNWFFHAYNFTFEIIDEPEIDHARHKISFPVKECGICPLYIKKNDECNWH* 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1277 1284 SMART till_3 5 141 IPR000157 GO:0007165
Tpr3g1277 1284 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 144 IPR035897 -
Tpr3g1277 1284 SUPERFAMILY "Winged helix" DNA-binding domain 402 506 IPR036390 -
Tpr3g1277 1284 PRINTS Disease resistance protein signature 201 216 - -
Tpr3g1277 1284 PRINTS Disease resistance protein signature 273 287 - -
Tpr3g1277 1284 PRINTS Disease resistance protein signature 366 380 - -
Tpr3g1277 1284 PRINTS Disease resistance protein signature 957 973 - -
Tpr3g1277 1284 Pfam TIR domain 5 170 IPR000157 GO:0007165
Tpr3g1277 1284 Gene3D Ribonuclease Inhibitor 498 741 IPR032675 -
Tpr3g1277 1284 SUPERFAMILY L domain-like 579 855 - -
Tpr3g1277 1284 Pfam C-JID domain 1125 1276 IPR045344 -
Tpr3g1277 1284 Gene3D - 2 171 IPR035897 -
Tpr3g1277 1284 Gene3D - 331 419 IPR042197 -
Tpr3g1277 1284 Gene3D Ribonuclease Inhibitor 907 1104 IPR032675 -
Tpr3g1277 1284 Pfam Leucine Rich Repeat 609 628 IPR011713 -
Tpr3g1277 1284 Gene3D - 172 329 IPR027417 -
Tpr3g1277 1284 Gene3D Ribonuclease Inhibitor 742 906 IPR032675 -
Tpr3g1277 1284 Pfam NB-ARC domain 183 397 IPR002182 GO:0043531
Tpr3g1277 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 425 IPR027417 -
Tpr3g1277 1284 ProSiteProfiles TIR domain profile. 4 167 IPR000157 GO:0007165
Tpr3g1277 1284 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 938 1052 - -
Tpr3g1277 1284 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 4 721 - -
Tpr3g1277 1284 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 842 951 - -
Tpr3g1277 1284 SUPERFAMILY L domain-like 761 1068 - -
Tpr3g1277 1284 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 721 IPR044974 GO:0006952
Tpr3g1277 1284 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 938 1052 IPR044974 GO:0006952
Tpr3g1277 1284 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 842 951 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1277 Tpr-Chr3 11329577 11335236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1277 772 941 WRKY Transcription Factor Family AT4G12020 32.941 3.85e-16 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1277 - - ccaj:109803335 1212.59