Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1276 ATGCAATCCCTCAAGTTACGCACGCATCTTTTTTATCCTCCTTTCACTTCTAACTCATTTCAATCCTTTCTCTATTCATTTTCCACCACTTCTTTATCATCCTCAAAAACCCAATACTCAAAAGAAACCACTTCATTATTTAACTTCCTTAATTCCAATGCTAAATTACCAAAATCACACTCCATTTTTATCTCTAAACGTGCTTCGAGGGCTACATTCCCTCAAAGGCCTTTATCTGTAATCAACTTTTTCAAACAAAATGGATTTTCCGAAACTCAGATTCACTCTATCGTTCGTCAGAGAGTTCAATTGCTGTTTTCAAATGTTGATAAAACTCTTAAACCTAAATTTGAGCTCTTTCGGCAATTGGGTTTTCAGGGTTCGGATTTATGTGACTTTATTTCCAAGCATCCAACTGTTTTGACTGCTAGTTTGAACAAAACATTGGTTCCGTCTGTGGAAGCTATTAAGAAAATTGTATGGAATGATAAAGAGCGTGTTCAAGTTTTGTTTAAATGTGGCTGGATACTCCCAAAGTACCAATTGTTTGTTGCCAATGTTGCTTTATTAGAGAGTTTTGGCATTGTCGGGGATCAGGTTGTGATTCTACTCAAACGACAGTCAAGATTTTTGGTTTCATCGCAATCTACTATTAGAAAGTATGTTTTGCAAGCTGAAGAATTGGGTTTCAATCAAAATTCAAGAATGTTGGTTCATGGACTTCATACGATAACTTCTTTGAGCCATAAAACATTTAAGAAAAAGCTGGATTTAATTCAGTGTTTTGGGTTTTCTAAAGATGAGAGCTTGCTTATGTTTAAAAAAGCTCCAGCTTTGCTTAGGGCATCCGAGAAGAAATTAAAGGTTGGAATTGAATTCTTCTTACACACAGTTACGCTGCCAAAGTCAATATTGGTTAATCGGCCTACAATTTTGATGTATAGCATGGAGGATCGAGTGTTTCCTCGATATAGAGTTTTTCAGCTTTTGAAATCACAAAATCTATGTAAGAAGGGTCCAAGCTTTGTTTCTATGTTATGTTATCCTGAGGACATGTTCTTGGAGTTTATATCACGGTTTAAAGAAAATACAGAGGCATTATTGATAGCTTACAAGGGGCATCTTCTGGAAGCGTAA 1137 0.3588 MQSLKLRTHLFYPPFTSNSFQSFLYSFSTTSLSSSKTQYSKETTSLFNFLNSNAKLPKSHSIFISKRASRATFPQRPLSVINFFKQNGFSETQIHSIVRQRVQLLFSNVDKTLKPKFELFRQLGFQGSDLCDFISKHPTVLTASLNKTLVPSVEAIKKIVWNDKERVQVLFKCGWILPKYQLFVANVALLESFGIVGDQVVILLKRQSRFLVSSQSTIRKYVLQAEELGFNQNSRMLVHGLHTITSLSHKTFKKKLDLIQCFGFSKDESLLMFKKAPALLRASEKKLKVGIEFFLHTVTLPKSILVNRPTILMYSMEDRVFPRYRVFQLLKSQNLCKKGPSFVSMLCYPEDMFLEFISRFKENTEALLIAYKGHLLEA* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1276 378 Pfam mTERF 182 353 IPR003690 GO:0003690|GO:0006355
Tpr3g1276 378 Pfam mTERF 81 173 IPR003690 GO:0003690|GO:0006355
Tpr3g1276 378 PANTHER EMB|CAB62602.1 28 374 - -
Tpr3g1276 378 PANTHER CGI-12 PROTEIN-RELATED 28 374 IPR003690 GO:0003690|GO:0006355
Tpr3g1276 378 Gene3D Transcription termination factor 3, mitochondrial 46 180 IPR038538 -
Tpr3g1276 378 Gene3D Transcription termination factor 3, mitochondrial 181 363 IPR038538 -
Tpr3g1276 378 SMART mt_12 235 265 IPR003690 GO:0003690|GO:0006355
Tpr3g1276 378 SMART mt_12 95 126 IPR003690 GO:0003690|GO:0006355
Tpr3g1276 378 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Tpr3g1276 378 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Tpr3g1276 378 SMART mt_12 302 333 IPR003690 GO:0003690|GO:0006355
Tpr3g1276 378 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1276 Tpr-Chr3 11325902 11327038 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr3g1276 mTERF 8.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1276 K15032 - zju:107425470 317.775