Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1265 ATGCTCCGAATCTCTTTCTTGTTAATTTTCATCATCACCGCCACAACCGTCGTCGTCGCCGATAATGACGACGACTCCGCGGTCATGTTAAGCCTTTTAAAAGCCCTAAAAAACCCTCCATCCGGCTGGTCTTCCGATACTCAATTCTGTGAATGGGACAAAAACAGAATCAAGTGCGATTCATCAAACCGCCGCGTAACCTACATAGACCTCTCTTCTCAAAACCTCGCCGGAACCCTACCTTCCAATCTCAACTCTCTCACTCAACTGACATCTCTCAATCTCTATAACAATGCTTTCTCCGGTCCTATTCCTTCTCTCGCCAACCTATCCTCCCTCAAAACCGTCAATCTAGGTAATAACCAATTCAACTCTGTCCCTCCCGCCGCATTTTCCGGCCTACCTTCACTCCAACAACTTGCTATCAGTTACAATTCTTTCCTTCCATGGACATTCCCTTCCGAGTTAACTCAGTTATCCAATCTCAACACCCTCGATTTAGATTCTGCAAATATCAACGGAAACTTACCGGACATTTTCTCCAATTTCACTGCTCTCACCGAAATTCGTCTCGCCTACAACAATCTCACCGGAGAATTACCTAACTCTCTCGCTACTTCCTCAATCCAAATTTTATGGCTCAATAACAACAACTTATCCGGTTCAATCGCTGTGATTGCTAATATGACGCAGTTATCTCAGGTATGGCTTCATGTTAATAAGTTCACTGGTCCAATTCCAGATTTATCGCAATGTACGAATTTGCTTAATCTGCAACTTCGAGATAATCAGTTAACCGGTTTGGTTCCTGATTCTCTGATGAATAATATGCCTAGCTTGCAGAACGTCTCTCTTAGGAATAATGAACTTCAGGGACCTTTTCCCGATTTTAAAGGTAAAAATGTGACAGTTGAGGATATTGGTGCAAGAAATAATTTTTGTCTTGGTAATACACCAGGACCTTGTAATGATATGGTTATGGTTTTGCTTCAAATTGCTAAGGGATTTGGGTATCCTGTTATATTGGCGCAGGAGTGGAAAGGGAATGATCCTTGTCCAGATCAAAGTTGGCGGTTTGTTACGTGTGACAAGGATAAGAATATTGTGTCTGTCATTTTAGTGAAGCAGAATTTGCAGGGAACAATTTCGCCTGCTTTTGCCAATTTGAAAAAATTGAAGAAATTGAATCTATCTGGGAATAATTTAACTGGTTCTATACCTCAGAGTTTGACTACATTGTCTCAGCTTGAGAGTCTTGATGTCTCTAACAATAACCTATCGGGACAGGTTCCCAATTTCTCACCGAAGGTGACATTAGTAACTGGTGGTAATGTTTGGATTGGTAAAGATCTTGGTTCTGGTCCCAATGGAAGGGGTGATGGATCGGGAAAGGGTAATTCGATGACGCCAGGTTCGATTGCTGGTATAGTGATTGGTGTTTTGCTTTTTGTTGTTGCTATGTTGTTTGTTTCTTGGAAGTGTTATTCTAGAAAGCGGCTTCGGAAATTTGGAAAGGTTAGTAATCCTGAAAATGGGGAAGGAAATGTTAAGCTTGATCTTGCATGTGTTTCGAATGGATATGGTGGTGTTCCGAGCGAGTTGCAAAGCCAGAGCAGTGGTGATCATAGTCAGCTTCATGGTTTTGATGCGGGAGGTGATGTAAATCCTATGATTTCGATTCATATTCTTCGACAAGTGACAAATGATTTCAGCGACGATAACATTTTGGGAAGGGGAGGGTTTGGTATTGTTTATAAAGGGGAGTTACCTGACGGAACTAAAATTGCTGTCAAGAGGATGATATCCGTTGCATCAGGAAGCAAAGGGTTGAATGAGTTTGAAGCAGAGATCGCTGTTCTTACTAAGGTTAGGCATAGACATTTGGTTGCTCTTATGGGATATTGCATCAATGGAAATGAGAGGCTTTTGGTGTATGAGCATATGCCTCAAGGGACATTAACGCAACATCTGTTTGAATGTCGTGAACATGGGTATACTCCTTTGACATGGAAACAAAGGTTGGTAATAGCTTTGGATGTTGGACGGGGGGTGGAATACTTGCACAGCTTAGCTCGGCAAAGCTTCATTCATAGAGACTTAAAACCATCAAATATACTATTAGGCGATGACATGAGAGCAAAGGTTGCAGATTTTGGGTTGGTTAAAAACACACCGGATGGGAAGTATTCTATCGAGACAAAGTTGGCGGGAACATTTGGATATCTTGCACCCGAGTATGCAGCTACTGGAAGAGTGACAACCAAAGTGGATGTTTACGCATTTGGCGTAGTTTTGATGGAACTGATCACAGGTAGAAAGGCATTAGATGATACTGTGCCTAGTGAAAGGTCTCATTTGGTTACTTGGTTCCGTAGGGTACTGATTAACAAGGAAGACATTCCAAAGGCAATTGATCCAACTCTCAACCCAGATGAAGAAACAATGTTGAGCATATATAAAGTGGCTGAGCTGGCTGGCCATTGCACCGTTCGTGAACCATATCAAAGGCCAGATATGGGGCATGCCGTGAATGTGTTGGGTCCCCTTGTGCAGCTATGGAAACCTACTACCCAAACAGACGAAGGAAATTATGGCGTTGACAATCAGATGAATCTTCCTGAAGCACTACAAAGGTGGCAAGCCGGCACTTCAACGCTATTTAGTGACATGTCCTTCTCACAAACCCAAACAAGTTCTAAATCTCCATCATTTGCAGGCAACTTTGATTCACCGGATTGCCGGTAG 2745 0.4251 MLRISFLLIFIITATTVVVADNDDDSAVMLSLLKALKNPPSGWSSDTQFCEWDKNRIKCDSSNRRVTYIDLSSQNLAGTLPSNLNSLTQLTSLNLYNNAFSGPIPSLANLSSLKTVNLGNNQFNSVPPAAFSGLPSLQQLAISYNSFLPWTFPSELTQLSNLNTLDLDSANINGNLPDIFSNFTALTEIRLAYNNLTGELPNSLATSSIQILWLNNNNLSGSIAVIANMTQLSQVWLHVNKFTGPIPDLSQCTNLLNLQLRDNQLTGLVPDSLMNNMPSLQNVSLRNNELQGPFPDFKGKNVTVEDIGARNNFCLGNTPGPCNDMVMVLLQIAKGFGYPVILAQEWKGNDPCPDQSWRFVTCDKDKNIVSVILVKQNLQGTISPAFANLKKLKKLNLSGNNLTGSIPQSLTTLSQLESLDVSNNNLSGQVPNFSPKVTLVTGGNVWIGKDLGSGPNGRGDGSGKGNSMTPGSIAGIVIGVLLFVVAMLFVSWKCYSRKRLRKFGKVSNPENGEGNVKLDLACVSNGYGGVPSELQSQSSGDHSQLHGFDAGGDVNPMISIHILRQVTNDFSDDNILGRGGFGIVYKGELPDGTKIAVKRMISVASGSKGLNEFEAEIAVLTKVRHRHLVALMGYCINGNERLLVYEHMPQGTLTQHLFECREHGYTPLTWKQRLVIALDVGRGVEYLHSLARQSFIHRDLKPSNILLGDDMRAKVADFGLVKNTPDGKYSIETKLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRKALDDTVPSERSHLVTWFRRVLINKEDIPKAIDPTLNPDEETMLSIYKVAELAGHCTVREPYQRPDMGHAVNVLGPLVQLWKPTTQTDEGNYGVDNQMNLPEALQRWQAGTSTLFSDMSFSQTQTSSKSPSFAGNFDSPDCR* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1265 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
Tpr3g1265 914 SMART serkin_6 570 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1265 914 SUPERFAMILY L domain-like 26 318 - -
Tpr3g1265 914 PANTHER RECEPTOR-LIKE KINASE TMK4 10 903 - -
Tpr3g1265 914 SMART LRR_typ_2 413 435 IPR003591 -
Tpr3g1265 914 SMART LRR_typ_2 252 275 IPR003591 -
Tpr3g1265 914 SMART LRR_typ_2 159 182 IPR003591 -
Tpr3g1265 914 SMART LRR_typ_2 389 412 IPR003591 -
Tpr3g1265 914 SMART LRR_typ_2 110 133 IPR003591 -
Tpr3g1265 914 ProSitePatterns Protein kinases ATP-binding region signature. 576 598 IPR017441 GO:0005524
Tpr3g1265 914 SUPERFAMILY L domain-like 324 433 - -
Tpr3g1265 914 ProSiteProfiles Protein kinase domain profile. 570 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1265 914 Gene3D Transferase(Phosphotransferase) domain 1 648 868 - -
Tpr3g1265 914 PANTHER OSJNBA0070M12.3 PROTEIN 10 903 - -
Tpr3g1265 914 Gene3D Ribonuclease Inhibitor 22 318 IPR032675 -
Tpr3g1265 914 Gene3D Ribonuclease Inhibitor 324 451 IPR032675 -
Tpr3g1265 914 ProSiteProfiles Leucine-rich repeat profile. 391 414 IPR001611 GO:0005515
Tpr3g1265 914 Pfam Leucine rich repeat N-terminal domain 328 363 IPR013210 -
Tpr3g1265 914 Pfam Leucine rich repeat N-terminal domain 23 53 IPR013210 -
Tpr3g1265 914 MobiDBLite consensus disorder prediction 892 906 - -
Tpr3g1265 914 CDD STKc_IRAK 576 849 - -
Tpr3g1265 914 MobiDBLite consensus disorder prediction 892 914 - -
Tpr3g1265 914 Pfam Leucine rich repeat 367 426 IPR001611 GO:0005515
Tpr3g1265 914 Pfam Leucine rich repeat 108 146 IPR001611 GO:0005515
Tpr3g1265 914 Pfam Protein tyrosine and serine/threonine kinase 574 787 IPR001245 GO:0004672|GO:0006468
Tpr3g1265 914 SUPERFAMILY Protein kinase-like (PK-like) 557 859 IPR011009 -
Tpr3g1265 914 Gene3D Phosphorylase Kinase; domain 1 535 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1265 Tpr-Chr3 11260251 11264080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1265 69 846 Receptor kinase-like Gene Family AT5G07280 31.716 6.00e-93 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Tpr3g1265 PK_Tyr_Ser-Thr 2.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1265 - - qsu:112030135 1113.6