Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1255 ATGGAAGTTGCTCTGCTCTCTTCATTTGTCGTTGACGAAGGAGATTTGGCTGCGTTTCTTGTGAAGACATATGACATTGTGAACGATCCCAACACAAACGAGATTGTTTCATGGAGCTCTACCAACAACAGCTTCGTTGTTTGGAACCCGACTGAATTTGCTCGTGGATTTCGAAAAATACATGATGGGCAATGGGAGTATGCTAATGAAAATTTTATAAAAGATCAAAAACATCTTCTGAAGAACATACAACGTAAGGACAGTCATCATCCTCGAGATTATGATGAACTAATAGAGAAAATCAACAATCATCAAAAGAGAACAAATCTTCGCATCGAACGTTTTCAGCAACGATTGGATGCTATGGAGACCATGCAGAAAAATTTGATGAACTTATTTGAGAAAGCTATTCAGAATCCTTCTTTTGTTGGTCAACTTTCTGACAAATTTGCATCAGGTTGA 462 0.3788 MEVALLSSFVVDEGDLAAFLVKTYDIVNDPNTNEIVSWSSTNNSFVVWNPTEFARGFRKIHDGQWEYANENFIKDQKHLLKNIQRKDSHHPRDYDELIEKINNHQKRTNLRIERFQQRLDAMETMQKNLMNLFEKAIQNPSFVGQLSDKFASG* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1255 153 Coils Coil 112 132 - -
Tpr3g1255 153 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 13 150 - -
Tpr3g1255 153 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 13 150 IPR027725 -
Tpr3g1255 153 SUPERFAMILY "Winged helix" DNA-binding domain 16 86 IPR036390 -
Tpr3g1255 153 SMART hsfneu3 15 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr3g1255 153 Gene3D - 12 59 IPR036388 -
Tpr3g1255 153 Pfam HSF-type DNA-binding 19 55 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1255 Tpr-Chr3 11199657 11200978 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1255 19 149 HSF AT4G13980 37.222 4.60e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Tpr3g1255 HSF_DNA-bind 3.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1255 K09419 - gmx:100816484 148.288