Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1253 ATGGAAACTGCTCCGCTCTCATCGGCTACCGCTGCCGGAAACGGTGGAGGTCCGGCACCGTTTCTTCAGAAAACGTATGACATGGTGAACGATCCCAGCACAGACGAGATCGTTTCATGGAGCTCTACCAATAACAGCTTCATCGTTTGGAATCCTCCTGAATTTGCTCGCGTTCTTCTTCCAACCTATTTCAAACACAATAATTTCTCCAGCTTCATTCGTCAGCTCAATACTTATGGATTTCGAAAAACACATGCTGAGCGTTGGGAGTTTGCTAATGATGATTTTATAAAAGATCAAAAGCATCTTCTGAAGAATATACACCGCAGGAAACCTATACACAGTCATAGTAATCCTCCAGGTTCTGTTGTAGATCCTGAAAGGGCGTCATATGATGAACAAATAGAGAAACTCTCACGCGAGAAAAGTTCTCTTGAATCCAATCTCTTAAGCTACAAACACCATCACTCAAAAACAAAGCTTCACCTGGATGAATTTCAGCAGCGTTTGGATGGTATTGAGAACAGGCAAAAAAAATTGCTGAACAACTTTGAGAAGGCTCTTCAGAATCCTTCTTTTGTTGATCAACTTTTGCGCAAAATCGAGTTCATGGATTTGGCGGCATTAAATAAGAAAAGGAGATTGCCTGAGGTTGACCACGTGCAGCCTGTTGCTGAAGGTAGCTTGGTTGACAATCATAGCAATTTTCGACCGGAATTTGGAAATGTTTTCCAACAAGATTTCTCAAACAAACTCAGACTGGAATTGTCACCAGCTGTCTCAGATATGAACTTGGTATCAGGTAGCACACAGGGGTCAAATGAAGATGAGGAAATCCCACAGAAGAACCTTTCTGATGGAGAACTAAAAGGAACACAGACAAGAACTGGCCTTGCTTTTGCGTCTGAAACAGTAGATCTTGCAGATACTGGGACGTCTTTTACTTTTAACATGGATTCGTGTTTGTCACGAAGAGCAACAACTACTGAGAACCCAAATCTTCACTCTCTGGAGCCAAGTAGTGAAGAAGGTGATAGCCATATATCCTGCCAACTGAATTTAACTTTGGCATCTTGTCCATTGGAATTCAACAGGAATTCATACTCCGCCCGATCACCCCAAATAGACTGTCAAGAAATTGGCAATTTGGCAGAATCAAGAGTTACCGTCATTGGTAAAGAATCTGAAAGTGGAGTTTCCTTAAACCGAATTGTGGCTAACGGGGTTATCAGTTTAGCTTCACCGCAGGAGGCTTCAGGTAACGGCCAAGTCAAACCAGCTGCTCCACATGCAGTGAATGACGTGTTTTGGGAACAGTTCCTCACTGAAAGACCAGGCTGTTTAGACAATGAAGAGGCAATATCCAACTATCGAGCAAATCCATATGACGAGCAAGAGGAAGGGCGAGCAGTTCATGGAATCTCCAGTAACATCAAGAATATGGATAATCTCACACTTTGA 1461 0.4278 METAPLSSATAAGNGGGPAPFLQKTYDMVNDPSTDEIVSWSSTNNSFIVWNPPEFARVLLPTYFKHNNFSSFIRQLNTYGFRKTHAERWEFANDDFIKDQKHLLKNIHRRKPIHSHSNPPGSVVDPERASYDEQIEKLSREKSSLESNLLSYKHHHSKTKLHLDEFQQRLDGIENRQKKLLNNFEKALQNPSFVDQLLRKIEFMDLAALNKKRRLPEVDHVQPVAEGSLVDNHSNFRPEFGNVFQQDFSNKLRLELSPAVSDMNLVSGSTQGSNEDEEIPQKNLSDGELKGTQTRTGLAFASETVDLADTGTSFTFNMDSCLSRRATTTENPNLHSLEPSSEEGDSHISCQLNLTLASCPLEFNRNSYSARSPQIDCQEIGNLAESRVTVIGKESESGVSLNRIVANGVISLASPQEASGNGQVKPAAPHAVNDVFWEQFLTERPGCLDNEEAISNYRANPYDEQEEGRAVHGISSNIKNMDNLTL* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1253 486 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 13 482 IPR027725 -
Tpr3g1253 486 Coils Coil 163 190 - -
Tpr3g1253 486 PRINTS Heat shock factor (HSF) domain signature 21 44 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr3g1253 486 PRINTS Heat shock factor (HSF) domain signature 59 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr3g1253 486 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr3g1253 486 Pfam HSF-type DNA-binding 21 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr3g1253 486 MobiDBLite consensus disorder prediction 267 289 - -
Tpr3g1253 486 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 13 482 - -
Tpr3g1253 486 SMART hsfneu3 17 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr3g1253 486 Coils Coil 128 155 - -
Tpr3g1253 486 MobiDBLite consensus disorder prediction 108 133 - -
Tpr3g1253 486 Gene3D - 16 111 IPR036388 -
Tpr3g1253 486 SUPERFAMILY "Winged helix" DNA-binding domain 17 110 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1253 Tpr-Chr3 11193669 11197256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1253 21 486 HSF AT4G13980 54.025 5.02e-156 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Tpr3g1253 HSF_DNA-bind 6.6e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1253 K09419 - gmx:100786408 718.383