Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1244 ATGCGTTGTTACGGCTTAACAATCCCCGGAAGCGATAATCGCTTCTTCATTCCAACACTAACTCCACCATCACTATCCTTCAAACCCAAACCCATAACCCGAATTTCATTCGGGTCAAAACTCAAAGCCACTTTCAACGACGGCGTTGTCGCCGACCAACTCAGTTTCTATGATCTTCTCGGTATATCCGAATCCGGTTCATTGATGGATATCAAAAGCGCTTATAAACAACTAGCAAGAAAATATCACCCTGATGTTTCTCCACCGGGTCGGGTCGAAGAGTATACCAAGAGGTTTATTCAGGTACAGGAGGCGTATGAAACGTTATCTGATCCTTCAAGGAGAATTATGTATGATAGAGATATGGCTAGAGGGATTCATCTTGCTTTCAATGCTCGTAAAAGATATAATCATTCTGATAATCAGGTGAGTGAACAAAGAGGCGAATGGAAATCTCGTTGGCAATCTCAACTCTCTGGTCTGAAGAGAAGAAGTGAGAGCAAGGATGCTGCTGAGAACATGTCATGGGCTGCTCGAATGCGCCAGCAGAGGGAAGAATTGTGA 564 0.4397 MRCYGLTIPGSDNRFFIPTLTPPSLSFKPKPITRISFGSKLKATFNDGVVADQLSFYDLLGISESGSLMDIKSAYKQLARKYHPDVSPPGRVEEYTKRFIQVQEAYETLSDPSRRIMYDRDMARGIHLAFNARKRYNHSDNQVSEQRGEWKSRWQSQLSGLKRRSESKDAAENMSWAARMRQQREEL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1244 187 ProSitePatterns Nt-dnaJ domain signature. 99 118 IPR018253 -
Tpr3g1244 187 Gene3D DnaJ domain 42 160 IPR036869 -
Tpr3g1244 187 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 34 186 - -
Tpr3g1244 187 CDD DnaJ 56 111 IPR001623 -
Tpr3g1244 187 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 34 186 - -
Tpr3g1244 187 MobiDBLite consensus disorder prediction 159 187 - -
Tpr3g1244 187 Pfam DnaJ domain 56 119 IPR001623 -
Tpr3g1244 187 SUPERFAMILY Chaperone J-domain 52 125 IPR036869 -
Tpr3g1244 187 PRINTS DnaJ domain signature 57 75 IPR001623 -
Tpr3g1244 187 PRINTS DnaJ domain signature 75 90 IPR001623 -
Tpr3g1244 187 PRINTS DnaJ domain signature 94 114 IPR001623 -
Tpr3g1244 187 ProSiteProfiles dnaJ domain profile. 55 122 IPR001623 -
Tpr3g1244 187 SMART dnaj_3 54 114 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1244 Tpr-Chr3 11116839 11120487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1244 57 119 C2H2 Transcription Factor Family AT1G74250 43.939 3.58e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1244 - - cam:101492872 309.686