Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1238 ATGGATTTTTTAAATCTATCTGCAAATCAGACCTTATTCTTGTCAATATCATATTTTAATACATCATCAGATTCTACAACCTTAACCTTCAATGTTTGTTCTGCTGCTCCACCAAATATTGTTTCAGATGGATTATGGGGTGGACAAAAAAATGGAAGGGTTCCAATGAAGTCTGCACTTCCTATGTTTGAGATGCAAGTTCTTGTGATTTTTGCTATCACACAAATCTTCGATTTATTCCTAAAACGTTTGGATTTCCCTGAATTTATTGGACAAATGATGGCTGGCCTAATTTTAGGTCCTTCAATTCAAATAAGAGAAATCGACAAATACAAGAATATATTGTTTCCATATGGAAGTCAAGACATACTTGCAACAATAACATCAATCGGTTATGCACTCTTCATCTTTATCAATGCTGTGCAAATGGATTTGAGCATGGTAACAAGGACAGGACACAAGGCTTGGACCATTGCAATCATGGGATTGGCTATGCCTTTACTCATTTGTCTTTTGATTCCACTCTCCATACTTCAAGGTACTAGTCATGAAGTTATAGCAACTTTTCCTAATGTGGTGCTACACCATACCATAACTTCTTTTGCAGTCATTGCTTCGCTCCTCAACGAACTTAAAATCCTTAACTCCGAACTTGGAAGGTTGGCATTATCCTCAGTGTTGGTGAGTGACATACTAGGAACAACTATGGGAAGTATTCTTAATGTCATAAAGTATTCACATGATTTAAGCAGGATCATAAAAGTTGGAATGCCATTGTTAGCTTTTGTTATCCTTGTTCCGTTGATTTTTCGGCCATTAATGTTTTGGATCATCAAACATACTAAAGAAGAAAGACCTGTGGATGATGGTTACATCTATGTTATCATTGTACTGGTATTTGGTTTAGGTTGGATTTCAGTTCGCATAAACCAAGATTTCATCTTAGGTGCATTTGTTTTGGGGTTGGCTGTGCCAGAAGGACCTCCATTAGGATCTGCATTGGTTAAGAAGCTTGAATTCTTTGGTACAAGTGTATTTCTGCCTATATTTGTGACTTGTTGTGTGATGAAGGCAGATTTGACTTTGCCGGATACACCAAGAGAAATTATTTTTACCGGTGGTTTCATTAGCTTTACACACTTTGTCAAAATAATAGCATACCTTATACCTTCCCTCATTTGCGAGATCCCCTTGAAAGATGCCTTGGCTCTTGCCCTAATTTTGAATGCAAAAGGTGTAGTGGATATTGGCATATTTTCTGGCTCATATGATACAAAGCTTTTTAATAATGCATCTTATGGAGTGATGATTGTCAGTATTATGATCATAGCGTGCCTAGTAAAATGGTTAGTGAAGATATTGTATGACCCATCAAGAAAATATGCCGGCTACCAGAGAAGGAACATCGTGAGTTTAAAACCGGATGCAGAACTGAGACTACTGGCCTGCATTCACAAACAATACAACATATCAGCTATAACAGATGTCATCGACATTTGTTCTCCAACAACAGAACAACCTATCATTGTGGATGCATTGCATCTTATTGAACTAGTTGGAAGGACATCCCCCATTTTCATCTCCCATCGTCTTCAAAAAACTGGCCACAAGTCTTACTCGGATGACGTCATTCTAGCTCTTGACCTATATGAACATGAAAACTATGGTGGAGTAACTACACACACTTACACAGCCATATCTCCACCTACCCTTATGCATGAAGACGTTTGTCAACTTGCATTGGACAAAGTTGCGTCCATCGTGATTCTTCCTTTCCACATAAGATGGACTGTGGATGGTGGCATTGAATCTGATGACAAGAACATAAGGTCCTTAAATTGCAAGGTATTAGAAGTATCTCCATGCACAGTAGGAATCCTCGTGACTCGTTCTTTGTTACAAAACAACTCATCCATTAAGCTAGCCGTGATTTTTCTTGGTGGAAGAGATGACAGAGAGGCTTTGTGCTTAGCTAAAAGAGCGATAAGGAACCTGAAAATCAACTTGGTTGTGTACCACCTTGCACTTGAGCTATACGTGCCAAACATGGAATATCTACTAGATAATGAGGCACTAGAAGAATTAAAGAAACCACCACAATATGGCTCGGAAAATGTTTATTACCAAAAAATGATTGTGAATGATAGTCAAAGGATATCTTCTGTTCTTCGCGATATAGCGAATGAACATGATTTTTTCATTGTTGGGAGAACACATGAGTCAGACTTACCTCAGTTAGAAGGGCTAAAAGATTGGAGTGAATATTCAGAGTTAGGCGTCATTGGTGATTTGATTGCTTCACCAGATTTTGGGAGCCGAGCCGGTGTTTTGGTAGTGCAGCAACAAGTCAAAGACAGATAG 2361 0.3846 MDFLNLSANQTLFLSISYFNTSSDSTTLTFNVCSAAPPNIVSDGLWGGQKNGRVPMKSALPMFEMQVLVIFAITQIFDLFLKRLDFPEFIGQMMAGLILGPSIQIREIDKYKNILFPYGSQDILATITSIGYALFIFINAVQMDLSMVTRTGHKAWTIAIMGLAMPLLICLLIPLSILQGTSHEVIATFPNVVLHHTITSFAVIASLLNELKILNSELGRLALSSVLVSDILGTTMGSILNVIKYSHDLSRIIKVGMPLLAFVILVPLIFRPLMFWIIKHTKEERPVDDGYIYVIIVLVFGLGWISVRINQDFILGAFVLGLAVPEGPPLGSALVKKLEFFGTSVFLPIFVTCCVMKADLTLPDTPREIIFTGGFISFTHFVKIIAYLIPSLICEIPLKDALALALILNAKGVVDIGIFSGSYDTKLFNNASYGVMIVSIMIIACLVKWLVKILYDPSRKYAGYQRRNIVSLKPDAELRLLACIHKQYNISAITDVIDICSPTTEQPIIVDALHLIELVGRTSPIFISHRLQKTGHKSYSDDVILALDLYEHENYGGVTTHTYTAISPPTLMHEDVCQLALDKVASIVILPFHIRWTVDGGIESDDKNIRSLNCKVLEVSPCTVGILVTRSLLQNNSSIKLAVIFLGGRDDREALCLAKRAIRNLKINLVVYHLALELYVPNMEYLLDNEALEELKKPPQYGSENVYYQKMIVNDSQRISSVLRDIANEHDFFIVGRTHESDLPQLEGLKDWSEYSELGVIGDLIASPDFGSRAGVLVVQQQVKDR* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1238 786 Pfam Sodium/hydrogen exchanger family 69 451 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr3g1238 786 Gene3D - 62 462 IPR038770 -
Tpr3g1238 786 PANTHER CATION/H + ANTIPORTER 21 785 - -
Tpr3g1238 786 PANTHER EXCHANGER, PUTATIVE-RELATED 21 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1238 Tpr-Chr3 11059264 11063161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1238 32 779 Antiporter Super Family AT3G44900 36.692 1.30e-161 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1238 - - mtr:MTR_8g085260 1065.06