Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1213 ATGGATTTTCAAGTCGTCGTTCTCGCCGGCGGCGTCTCCAAAAAACTCCTCCCCCTCGTTTCAAAGGAACTTCCGAATGCTTTACTTCCGGTGGCTAATCGTCCGGTTCTCTCTTACGTTGTTGAGCTTTTGGAGCTTAGCAACCTTAAAGATCTCATTGTGGTAGTTGAAGGTAAAGATGTTGCTCTTAACGTTGGTGCTTGGATTTCTGGAGCTTATGCTGATCGTCTCCATGTCGAGGTTGCTTCAGTTCCGGAGGATGTGGGAACAGCTGGTGCAATTCGAGCAATTGCACACCATCTAACTGCGAAAGATATTTTGATTGTAAGCGGTGATCTTGTTTCCGATGTGCCGGTTGGTGCTGTTGCGGCTACTCATCGACGACATGATGCGGTTGTCACTGCTTTGCTCTGTAATGCTCCTATAAGTGGACCTTTGGAGTCGGTGTCTTCTGGTGGGAAAGACAAAACCAAGAAACCTGGCCGCTATGATTTGATAGGGTTGGACCCTACAAAACAGTTTTTACTTCACATAGCTACTGGAGCTGAAGTAGAAAAAGATCTTCGAATTCAGAAGAGCATACTTCGTGCCGTTGGCCAGATAGAAATAAGAGCCGATCTAATGGATGCCCACTTGTATGCATTCAAAAGATCAGTTTTACTAGAAGTTCTAGATCAGAAGTCTGCGTTTCAAAGCTTAAAGCATGATGTATTGCCATATCTTGTCCGCAGCCAACTGCAATCAGAAGTATTATTAAATGGTACACCACAAGCAGAAGAAAATGGAACTGAGAAGGTTAATTCTCAAAGCAATCAACAAATGATATCTCAAATACTTGCTAATGCATCTGAGCCGACCTTTCATCTACGACATACACTTGGTACTATTGGTTCTGATTCTGTTCGAAGAGCCCATAAATGTTGCGTTTATATTGCTGGGAGTAGCAAGTACTGTGCTCGCCTGAATTCTATACAAGCATACAATGATATAAACCGAGATGTAATAGGAGAAGCTAGTCATTTGTCAGGGTATTCCTTCTCTGCTCATAACAACATTATCCATCCTACTGCAGAGCTTGGGGCAAAAACAACTGTAGGACCGCATTGTATGCTGGGGGAAGGTTCACAGATGGGTGACAAGTGCAGTGTAAAACGGTCTGTCATTGGTCGCCACTGTAGGATAGGTGCCAATGTTAAGGTTGTTAATTCCGTAGTTATGAACCATGTTACTATTGGTGACTTTTGTTCAATCCAAGGTTCTGTCATTTGCAGCAATGTACAGCTCCAAGAACGTGCCATACTAAAAGATTGTCAAGTTGGAGCAGGTTTCGTGGTCACTTCCGGTAGTGAGCACAAAGGAGAGGTATTGGCTAAGAAATGA 1380 0.4362 MDFQVVVLAGGVSKKLLPLVSKELPNALLPVANRPVLSYVVELLELSNLKDLIVVVEGKDVALNVGAWISGAYADRLHVEVASVPEDVGTAGAIRAIAHHLTAKDILIVSGDLVSDVPVGAVAATHRRHDAVVTALLCNAPISGPLESVSSGGKDKTKKPGRYDLIGLDPTKQFLLHIATGAEVEKDLRIQKSILRAVGQIEIRADLMDAHLYAFKRSVLLEVLDQKSAFQSLKHDVLPYLVRSQLQSEVLLNGTPQAEENGTEKVNSQSNQQMISQILANASEPTFHLRHTLGTIGSDSVRRAHKCCVYIAGSSKYCARLNSIQAYNDINRDVIGEASHLSGYSFSAHNNIIHPTAELGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANVKVVNSVVMNHVTIGDFCSIQGSVICSNVQLQERAILKDCQVGAGFVVTSGSEHKGEVLAKK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1213 459 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 459 - -
Tpr3g1213 459 CDD LbH_eIF2B_gamma_C 370 450 - -
Tpr3g1213 459 Pfam Nucleotidyl transferase 6 137 IPR005835 GO:0009058|GO:0016779
Tpr3g1213 459 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 347 IPR029044 -
Tpr3g1213 459 Gene3D Hexapeptide repeat proteins 348 457 - -
Tpr3g1213 459 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 425 IPR029044 -
Tpr3g1213 459 CDD eIF-2B_gamma_N 3 220 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1213 290 450 Eukaryotic Initiation Factors Gene Family AT4G18300 27.174 6.43e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1213 K03241 - gmx:100783346 797.349