Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr3g1194 | ATGGATATGGAACATAACAAACAAAAGAGCAACGGAGATGAACACAGTGAGAAACTGGTACTGAAGAATAGGTCCAAGTTTGTTGGAGTGAGACAAAGGGCATCAGGGAAATGGGCAGCAGAGATTAAAGACACATCAAAGAACATTAGGATGTGGCTTGGTACATATAAAACTGCCGAGGAAGCTGCTCGAGCTTATGATGAAGCTGCTTGTCTTCTTCGAGGTTCAAACACTCGCACCAATTTCTCTATAACTCATTCCATTCCGTCCAATTCTCCTATATCTCTCAAACTCAAAAACCTCCTCCATCGAAAATCAATCTCAAATCAACATCAAAACAAGTCCACTACGACGGCTTCCTGTTTTCAAGGTGCTCCTATTGATAATAGCATCATGGTAATGGAAAATGAAAACAATTCTTCTTGTAGTAGTGAAGAGTCAAAGTCTTTGTTTTGGGTTCAGAATCAAGTATCTGAATATAATCCTTATTATGGGGTTGATATGAATATGATGAACTGTTCATTGGGTCTTACACAAAATACATTGCAGTTTGATTATTCTTGGCCATTACCTCAACAAAGGATTAACGAGTTAACAATACCAAAAGATAATATGAATGTATATGGCATGGATGAGTTCTATGTGGAGAATACATACGAATCCAAGTATGAATATGATGTCAATTATCCTCTTTCCCACTTGTTCTGCTTCACCTGA | 717 | 0.378 | MDMEHNKQKSNGDEHSEKLVLKNRSKFVGVRQRASGKWAAEIKDTSKNIRMWLGTYKTAEEAARAYDEAACLLRGSNTRTNFSITHSIPSNSPISLKLKNLLHRKSISNQHQNKSTTTASCFQGAPIDNSIMVMENENNSSCSSEESKSLFWVQNQVSEYNPYYGVDMNMMNCSLGLTQNTLQFDYSWPLPQQRINELTIPKDNMNVYGMDEFYVENTYESKYEYDVNYPLSHLFCFT* | 239 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr3g1194 | 238 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 133 | 222 | - | - | |
Tpr3g1194 | 238 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 17 | 120 | - | - | |
Tpr3g1194 | 238 | Pfam | AP2 domain | 25 | 75 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr3g1194 | 238 | ProSiteProfiles | AP2/ERF domain profile. | 26 | 83 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr3g1194 | 238 | SUPERFAMILY | DNA-binding domain | 25 | 84 | IPR016177 | GO:0003677 | |
Tpr3g1194 | 238 | CDD | AP2 | 25 | 82 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr3g1194 | 238 | PRINTS | Ethylene responsive element binding protein signature | 27 | 38 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr3g1194 | 238 | PRINTS | Ethylene responsive element binding protein signature | 49 | 65 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr3g1194 | 238 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-11 | 17 | 120 | - | - | |
Tpr3g1194 | 238 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-11 | 133 | 222 | - | - | |
Tpr3g1194 | 238 | SMART | rav1_2 | 26 | 89 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr3g1194 | 238 | Gene3D | AP2/ERF domain | 25 | 85 | IPR036955 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr3g1194 | Tpr-Chr3 | 10751423 | 10752437 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr3g1194 | 23 | 103 | AP2-EREBP Transcription Factor Family | AT5G19790 | 75.309 | 2.33e-38 | 132 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Tpr3g1194 | AP2 | 8.4e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr3g1194 | K09286 | - | gmx:100809046 | 259.996 |