Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1191 ATGTTGAAGTCGAAGAATAATTCAAAGAATAAGAAGTCGGATAAGATACATTACTTACGTTATGTTTGTAACAAAGAAGGTTTTAAGAAAGGAAGTTTGCTTAATCCGAACAACAAGCCAAGATCAGACAGTCCGGTTGTTATTGAATTTGAAAAAGTGAAAGAGAGACCGGAGGAAAGGATTGGTTGTAAAGCTGGAATATATCTGAAGTTGGATGAAGCATTGAATGTTTATAAGATATATAGATGGGAAGGGACACACTGTCATCAACTACATAGAAAAGAGCATCACCGTTATCTCAGATCATTCCGAGAAGTAAATCAAGTTCAAGGACAACTTGCTTTAATTAATTCTAAAGCTGGAATGTCGATGAGGACGTCTTATGAAGTCATGGGTCAAGGAGTTGGAGGCACGGAGAATCTCCCATTTCGGTTTTCGGACTTAAAGAATTATTTGATGACAATTCGTTCAAAGGAGATGATGAGGGGTGAAGCAACTGTAATTCAAGAGTTTTTTAGGAATGAAGCTATGTCGAAACCATCTTTTTACTATGATATGCAAGTTGATGCTGCAGAAGACATAGCTAGCATTTTTTGGGCAGATGGAATTATGCAACTGAATTATTCTTTATTTGGCGATGTCATCAGTTTCGATACAACGTACCGAACAAACAATCAATATCGTCCATTAGGTTAG 696 0.3678 MLKSKNNSKNKKSDKIHYLRYVCNKEGFKKGSLLNPNNKPRSDSPVVIEFEKVKERPEERIGCKAGIYLKLDEALNVYKIYRWEGTHCHQLHRKEHHRYLRSFREVNQVQGQLALINSKAGMSMRTSYEVMGQGVGGTENLPFRFSDLKNYLMTIRSKEMMRGEATVIQEFFRNEAMSKPSFYYDMQVDAAEDIASIFWADGIMQLNYSLFGDVISFDTTYRTNNQYRPLG* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1191 231 Pfam FAR1 DNA-binding domain 5 92 IPR004330 -
Tpr3g1191 231 PANTHER OS03G0181600 PROTEIN 6 230 - -
Tpr3g1191 231 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 230 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1191 Tpr-Chr3 10727569 10728264 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr3g1191 FAR1 7.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1191 - - mtr:MTR_0558s0020 414.461