Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1189 ATGGATTTAACGTCCACTTCATCTGGAATTGGTGATATTCATTCGACTGAAGCATCTGGAAAGGTTGAAGATTTCTATGGTCAGTATGCATATAAAACTGGATTTTCAATCAGGAGTATGTTGAAGTCGAAGAATAATTCAAAGAATAAGAAGTCAGATAAGATACATTACTTACGTTATGTTTGTAACAAAGAAGGTTTTAAGAAAGGAAGTTTGCTTAATCCGAACAACAAGCCAAGATCAGACAGTCCGGTTGTTATTGAATTTGAAAAAGTGAAAGAGAGACCGGAGGAAAGGATTGGTTGTAAAACTGGAATATATTTGAAGTTGGATGAAGCATTGAATGTTTATAAGATATATAGATGGGAAGGGACACACTGTCATCAACTACATAGAAAAGAGCATCACCGTTACCTCAGATCATTCCGAGAAGTAAATGAAGTTCAAGGACAACTTGCTTTAATTAATTCTAAAGCTGGAATGTCGATGAGGACGTCTTATGAAGTCATGGGTCAAGGAGTTGGAGGCACGGAGAATCTCCCATTTCGGTTTTCGGACTTAAAGAATTATTTGATGACAATTCGTTCAAAGGAGATGATGAGGGGTGAAGCAACTGTAATTCAAGAGTTTTTTAGGAATGAAGCTATGTCGAAACCATCTTTTTACTATGATATGCAAGTTGATGCTGCAGAAGACATAGCTAGCATTTTTTGGGCAGATGGAATTATGCAACTGAATTATTCTTTATTTGGCGATGTCATCAGTTTCGATACAACGTACCGAACAAACAATCAATATCGTCCATTAGCTGCTACTTTTGATTGGTTATTTACCACATTCTTGACGTGCATGTCTAATAAGAAACCACAGACGATATATACAGACCAGGCTACTGCGTTGTTGAAGTCAGTTCCGAATATTTTTCAAGGTGTTTTCCATGGTCTTTGTTCGTGGCACATGTCAGAGAATGCAAAGAAAAATCTCGGTACTCGTGCGAACAGTTCCTTTTTTGATGAGTTAACTAATTTGATTTCAAATGTAGAAGACGAATCAGATTTTGACTACAATTGGAATCGGATGATGAAAAATTGTTTTGATGAAAGGCCTATTTCAGACTGGACATGGTTTGTCCAGACTCATAGGAATCGTATGCACTGGTCTTCAGCTTGGGTCAAGTCACATTTTACAGCTGGTCTGAAGACGACTCAGTTAAGTGAGTCTTTCAATGCTTTTCTTCGTGGATTTTTGCAGCCATACCATTCACTTGTTCAATTCTTTAGTCATTTCAACGTTATGGTTCAGAGGATGAGGGATAATCATGCTGATTTGGACTTCAAGGCTGCTAACACTAGAACAAGAAAAAATTACCCCAACAGTCAACTGATGCGGTCCGTTGTAAAGAAGTACACACCAGCTTCTTTTGCATTTATCCACAGGCAATATGACCTTTCCTTCAAATACTATTATCAGGAGGACACATCAAAAGGGTCTGAGTTAAATAAGTTGGCATTGCTGGGGATGGAAACAAATGATTCAGTTAAGACCGATGCAGTGACGGAGGAGAAAAATGATGTGAAACCAGAAGTTGAGAAGAAGGATCACAAAACTGATGCGAAGAAGGATGATAAAACTGATGAGAAGAAGCATGAGAAGAAGGATGAGAAAAATGATGAGATAAAGGATGTGGGACGTGGAGCTGATGACAAAAATGATGGAAATTCAACTAGCGAAGAAGAAGAGTTTGATGCCAATAAGATGGATGACGCAGTGAGAACATCATGCAATGTGGGACTTTCACCCACACAACAAACAATCTTGCAGTTTCCACAATATTTTGATGCCGGTGAAGGTTCAAATGAAAGGAGGTTGCAGAAACAAGACAATAGCAAAGTTTCTGCAGTGGAGACATAG 1911 0.3836 MDLTSTSSGIGDIHSTEASGKVEDFYGQYAYKTGFSIRSMLKSKNNSKNKKSDKIHYLRYVCNKEGFKKGSLLNPNNKPRSDSPVVIEFEKVKERPEERIGCKTGIYLKLDEALNVYKIYRWEGTHCHQLHRKEHHRYLRSFREVNEVQGQLALINSKAGMSMRTSYEVMGQGVGGTENLPFRFSDLKNYLMTIRSKEMMRGEATVIQEFFRNEAMSKPSFYYDMQVDAAEDIASIFWADGIMQLNYSLFGDVISFDTTYRTNNQYRPLAATFDWLFTTFLTCMSNKKPQTIYTDQATALLKSVPNIFQGVFHGLCSWHMSENAKKNLGTRANSSFFDELTNLISNVEDESDFDYNWNRMMKNCFDERPISDWTWFVQTHRNRMHWSSAWVKSHFTAGLKTTQLSESFNAFLRGFLQPYHSLVQFFSHFNVMVQRMRDNHADLDFKAANTRTRKNYPNSQLMRSVVKKYTPASFAFIHRQYDLSFKYYYQEDTSKGSELNKLALLGMETNDSVKTDAVTEEKNDVKPEVEKKDHKTDAKKDDKTDEKKHEKKDEKNDEIKDVGRGADDKNDGNSTSEEEEFDANKMDDAVRTSCNVGLSPTQQTILQFPQYFDAGEGSNERRLQKQDNSKVSAVET* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1189 636 Pfam FAR1 DNA-binding domain 24 131 IPR004330 -
Tpr3g1189 636 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 21 486 IPR031052 GO:0006355
Tpr3g1189 636 PANTHER OS03G0181600 PROTEIN 21 486 - -
Tpr3g1189 636 MobiDBLite consensus disorder prediction 515 587 - -
Tpr3g1189 636 Pfam MULE transposase domain 271 323 IPR018289 -
Tpr3g1189 636 MobiDBLite consensus disorder prediction 609 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1189 Tpr-Chr3 10721697 10725310 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr3g1189 FAR1 9.9e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1189 - - mtr:MTR_0558s0020 438.728