Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1188 ATGGCTTCTCCTGGTGGAACATATTCATCTGGAACAAGCTCTCTTCAAAACTCTGGATCTGGATCAGAGGATCTGCAGGTGAATATAACAGATCAAAAGAAGAGGAAGAGAATGCAATCGAATCGAGAATCAGCAAGAAGATCAAGGATGAAGAAACAGCAACATATGGAAGATCTTAGCAATCAAATTGAACAATTGAAAAAAGAGAATAATCAAATAAGCACAAACGTAGGTGTAACTACTCAGATGTACCTGAAAGTTGAATCTGAGAATGAAATTCTTAGGGTTCAAATGGCTGAATTGAGTAACAGATTGCAATCTCTTAATGATATTATTCATTACATTGAATCAAGTAATAATTCATTGTTTCAAGAGACTGATCAATTGTTCAATGATTGTGGATTTTTGGACAATTGGAATACTTTTCCTGTTAATCAACCAATCATGGCCTCTAATGACATGTTGATGTATTGA 474 0.346 MASPGGTYSSGTSSLQNSGSGSEDLQVNITDQKKRKRMQSNRESARRSRMKKQQHMEDLSNQIEQLKKENNQISTNVGVTTQMYLKVESENEILRVQMAELSNRLQSLNDIIHYIESSNNSLFQETDQLFNDCGFLDNWNTFPVNQPIMASNDMLMY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1188 157 Gene3D - 31 86 - -
Tpr3g1188 157 Coils Coil 84 111 - -
Tpr3g1188 157 SUPERFAMILY Leucine zipper domain 33 87 IPR046347 GO:0003700|GO:0006355
Tpr3g1188 157 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 31 77 IPR004827 GO:0003700|GO:0006355
Tpr3g1188 157 Coils Coil 42 76 - -
Tpr3g1188 157 MobiDBLite consensus disorder prediction 28 64 - -
Tpr3g1188 157 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 36 51 IPR004827 GO:0003700|GO:0006355
Tpr3g1188 157 Pfam bZIP transcription factor 33 91 IPR004827 GO:0003700|GO:0006355
Tpr3g1188 157 CDD bZIP_plant_GBF1 34 84 IPR045314 GO:0003700|GO:0006355
Tpr3g1188 157 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 1 156 - -
Tpr3g1188 157 MobiDBLite consensus disorder prediction 1 27 - -
Tpr3g1188 157 SMART brlzneu 29 93 IPR004827 GO:0003700|GO:0006355
Tpr3g1188 157 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 156 - -
Tpr3g1188 157 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1188 Tpr-Chr3 10710588 10712043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1188 29 157 bZIP Transcription Factor Family AT4G34590 52.555 5.27e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr3g1188 bZIP_1 1.1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1188 K25786 - gmx:778139 167.162