Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1183 ATGGCTGTGTCGTGTGCGGGACTAATCATTTTAGCTGTCTCCGCATTATTGCTATTAATTATAAGTGACTCTATCTTTTCTTGGCAGTTCCCTGATCCATGCCCCTATGCATTAGAACACCCCTGCGGAATAATATTCACCACACCATTTAGATATGGGTGTGTGAATCCTAGATTCGAAGTAACATGTGAAAACAACAAATCCGTAATTTACTTCAACTATGGAAAACGTCAAGCCAGGGCCATTATAGTTTCTAATTCATCCTCCTCTTCATTCCGTTACATAATGACCGGAGTTAGTCCTCATAATAACTGCCCTGCCATCAATTCTTTTTCTCTTCCGTATGAAAACATCTCATTCATTACCGCTGATGATGATCGGAATTACATGGTGGTTTTGAGATGCGAGAAAGCTGTAGATGACTATGCCTATGGCTATAGGGACATTTCTTTAGAAAAGTGTGGTGGCGAAGAAAAGCAGTATTATTCATATGTTGTTATGAATGATTACTACGGAACAAATTTTGTTGTGGAAAACATAGAAGAGTCATGCAGAATAGAGATGAAGTTAACGGTAAAAAAGTGGGATGAAAAGGTGAAATGCAATAGGAAATGCAGGTATCCAAAGGATGTTCACAGTGAGTATGTCAACGGAATTGAGGTTCGTTGGCGACCGTACTGTGGGCAGCAGAAGCAAGACAGAGAGAGTGATCGAGAAGGGAAAAGGAAACAACGATTGCCACTCCTCTGCATTCTCTACCAAACAGCATTCACCTGCATTGATATGACACCCATGCTGTTTCTATGGATTGTTGGAAAATTTGTTCTTGGATCACCCTTTGTGGTTCTGGTCTTGATATGTAAATGGAGAAAAAAGCATCAATCCATATATGACACAGTTGAAGATTTTATCCAAACTCACAACAATTTCATGCCCATTAGATACTCTTACTCCCAAATCAAAACAATGACTAAACGTTTCAAGAATAAGTTGGGTGAAGGAGGCTATGGTTCTGTCTATGAAGGAGAGCTTCGAAGCAAACGCAAAGTAGCTGTTAAGGTATTGACCAAGTCTCAAACCAATGGACAAGACTTCATCAACGAAGTTGCAACAATTGGAAGAATTCATCATGTCAATGTGGTGCAGCTAATTGGATTTTGTGCCGAAAGAACAAAGCAAGCTCTGATCTATGAATTTATGCCAAATGGTTCTCTTGATAAACACACATTTTCACAAGAGCAAGGAAACTCATCCTCATTAAGCTACGATAAGATCTATGACATTTCTCTTGGAATTGCTCGTGGAATTCAATACTTACATCAAGGCTGTGAAATGCAAATCATACATTTTGACATAAAACCTCATAACATTCTTCTTGATGAGAATTTCAACCCGAAGATATCCGATTTTGGTTTGGCAAAGTTGTACCGAATAGATCAAAGCATTTTGACTTTAACAGCAGCAAGAGGAACAATGGGGTACATGGCTCCTGAGTTGTTGTACAAGAACATCGGAAACCTCTCACACAAAGCTGATGTTTATAGTTTTGGAATGATGTTAATGGAAATGGCAGGTAGGAAAAAGAACATAAATTATATAGAGAATTATTGGCAAGACTACTTTGCTAAATGGATTTATGATCAATTTGAGGAAACAATAGATACAAACAATGGAACAGAGGAGGAAAAGAAAATTGCAATGAAGATGATTGTGATTGCGTTGAAATGCATACAAATGAAACCAGATGATCGTCCCTCAATGAATGAAGTGATAGATATGCTTGAAGGAGATGAAGTGCCTCAACACCTTCCTCCTGATCCTGAATCTCTCTTAACATGGCAAAGGATGTCAGCTGATGCAAATGAATCCGACAACAACTAG 1881 0.3865 MAVSCAGLIILAVSALLLLIISDSIFSWQFPDPCPYALEHPCGIIFTTPFRYGCVNPRFEVTCENNKSVIYFNYGKRQARAIIVSNSSSSSFRYIMTGVSPHNNCPAINSFSLPYENISFITADDDRNYMVVLRCEKAVDDYAYGYRDISLEKCGGEEKQYYSYVVMNDYYGTNFVVENIEESCRIEMKLTVKKWDEKVKCNRKCRYPKDVHSEYVNGIEVRWRPYCGQQKQDRESDREGKRKQRLPLLCILYQTAFTCIDMTPMLFLWIVGKFVLGSPFVVLVLICKWRKKHQSIYDTVEDFIQTHNNFMPIRYSYSQIKTMTKRFKNKLGEGGYGSVYEGELRSKRKVAVKVLTKSQTNGQDFINEVATIGRIHHVNVVQLIGFCAERTKQALIYEFMPNGSLDKHTFSQEQGNSSSLSYDKIYDISLGIARGIQYLHQGCEMQIIHFDIKPHNILLDENFNPKISDFGLAKLYRIDQSILTLTAARGTMGYMAPELLYKNIGNLSHKADVYSFGMMLMEMAGRKKNINYIENYWQDYFAKWIYDQFEETIDTNNGTEEEKKIAMKMIVIALKCIQMKPDDRPSMNEVIDMLEGDEVPQHLPPDPESLLTWQRMSADANESDNN* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1183 626 ProSiteProfiles Protein kinase domain profile. 325 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1183 626 Gene3D Phosphorylase Kinase; domain 1 299 399 - -
Tpr3g1183 626 Pfam Protein kinase domain 328 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1183 626 PANTHER RUST RESISTANCE KINASE LR10-RELATED 62 607 IPR045874 GO:0004672
Tpr3g1183 626 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Tpr3g1183 626 MobiDBLite consensus disorder prediction 601 626 - -
Tpr3g1183 626 Gene3D Transferase(Phosphotransferase) domain 1 400 602 - -
Tpr3g1183 626 SUPERFAMILY Protein kinase-like (PK-like) 304 595 IPR011009 -
Tpr3g1183 626 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 62 607 - -
Tpr3g1183 626 SMART serkin_6 325 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1183 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1183 Tpr-Chr3 10675209 10678210 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1183 314 607 Receptor kinase-like Gene Family AT5G38280 51.485 2.43e-101 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr3g1183 Pkinase 6.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1183 - - mtr:MTR_4g073220 861.292