Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1182 ATGGCTATGTGGGGCGTGGGACTAATCATTTTTGCTGCCTTTGTAATATGGATATTTATGATTACCTTAGAAGGTGGATGCTTCATTACATCAGTACACTGCGGAACAACATTCAACGAATCTTTATTCGATTCATTTGGAGAATCGTGTGTGTATCCCAGTTTCGAAGTAATATGTGAAAACAACAAATCAGTAATTTACTTCAACTATGGTGACCGTCAGGCTAACGCCATCCTAGTTTCTAATTTATCCTCTTTCCGTTACATAATCACCGGAGTTAGTCCTGATAATAACTGCCTTATCCTCAATTCATTTTCTCTTCCGTACGAAAACGCCTCATTCTTTTCTGATCCTTATGATTTTGAATATATAGTGGTTATGAGATGCGAAAAACCAGTAGAGTTTGTCAACTACTACGAGAGTATTTCTTCAGAGGGGTGTGGTGGTGGTGGTGGAATTGATGGTGAGGAAAAGCAATTCTATTCATATGTTATGCAGATTGACGGAGAAGAAAGTCTGAGTGTGACACACATAGCAGAGTCATGCAGAATAGAGATGAAGGTAATGATAAGTAATTGGGATGAAAAGGTGATATGTAATGATAAGAGGAAGTGTGGTTATGCGGAGGAGGTTCACAGTGAGTATCTCAATGAAATTGAACTTCGTTGGCAACCAAGACGCTGTGGGAAGCAGCAAGACAATCATGGGGAAGGGACAAGGAAACCACCACGATCGCCACTTCGCTGCATTATCCGTCATACAATAGACACCTGCATTCGAATGCTACGTGCCATGCTGTCCCTATGGATTGTTGGAAAATATGTTCTTGGATCACCCTTTGTGGTTTTGGTCTTGATATGGAAATGGAGAAAAAAGCATCAATCCATATATGACACAGTTGAAGATTTTATCCAAACTCACAACAATTTCATGCCCATCAGATACTCTTACTCTCAAATCAAAACAATGACCAAAAGTTTCAAGAATAAGTTGGGTGAAGGAGGCTATGGTTTTGTCTATGAAGGAGAGCTACGAAGCAAACGCAAAGTAGCTGTTAAGGTATTGACCAAGTCTCAAACCAATGGACAAGACTTCATCAACGAAGTTGCAACAATTGGAAGAATTCATCATGTTAATGTGGTGCAGCTAATTGGATTTTGTGCCGAAAGAACAAAGCAAGCTCTGATCTACGAGTTCATGCCTAATGGTTCTCTTGATAAATACACATTTTCACAAGACCAAGGAAACTCATCCTCATTAAGCTACACTAAAATCTATGACATTGCTCTTGGAATTGCTCGTGGAATTCTATACTTACATCAAGGTTGTGACATGCAAATCATACATTTTGATATAAAACCTCATAACGTTCTTCTTGATGAGAATTTCAACCCGAAAATATCCGACTTTGGTTTGGCAAAGTTGTACCGAATAGATCAAAGCATTTTAACTTTAACTGCAGCAAGAGGAACAATGGGGTATATGGCTCCTGAGTTGTTGTACAAGAACATCGGAAGCATATCTAACAAAGCTGATGTTTATAGTTTTGGAATGATGCTAATGGAAATGGCAGGTAGAAAAAAGAACATAAATTATATGGAGAATTATTGGCAAGACTACTTTGCGAAATGGATTTATGATCAATTTGAGGAAACAATAGATATAAAAAATGGCACAGAGGAGGAAAAGAAAATTGCAATGAAGATGATTGTGATTGCGTTGAAATGCATACAAATGAAACCAGATGATCGTCCCTCAATGAATGAAGTGATAGATATGCTTGAAGGAGATGAAGTGCCTCAACAGATTCCACCTGATCCTGAATCTCTCTTAACCTGGCAAAAGATGTCAGCAGATGCAAATGCATTTGATGACAAGTAA 1881 0.3844 MAMWGVGLIIFAAFVIWIFMITLEGGCFITSVHCGTTFNESLFDSFGESCVYPSFEVICENNKSVIYFNYGDRQANAILVSNLSSFRYIITGVSPDNNCLILNSFSLPYENASFFSDPYDFEYIVVMRCEKPVEFVNYYESISSEGCGGGGGIDGEEKQFYSYVMQIDGEESLSVTHIAESCRIEMKVMISNWDEKVICNDKRKCGYAEEVHSEYLNEIELRWQPRRCGKQQDNHGEGTRKPPRSPLRCIIRHTIDTCIRMLRAMLSLWIVGKYVLGSPFVVLVLIWKWRKKHQSIYDTVEDFIQTHNNFMPIRYSYSQIKTMTKSFKNKLGEGGYGFVYEGELRSKRKVAVKVLTKSQTNGQDFINEVATIGRIHHVNVVQLIGFCAERTKQALIYEFMPNGSLDKYTFSQDQGNSSSLSYTKIYDIALGIARGILYLHQGCDMQIIHFDIKPHNVLLDENFNPKISDFGLAKLYRIDQSILTLTAARGTMGYMAPELLYKNIGSISNKADVYSFGMMLMEMAGRKKNINYMENYWQDYFAKWIYDQFEETIDIKNGTEEEKKIAMKMIVIALKCIQMKPDDRPSMNEVIDMLEGDEVPQQIPPDPESLLTWQKMSADANAFDDK* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1182 626 ProSiteProfiles Protein kinase domain profile. 325 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1182 626 Pfam Protein kinase domain 328 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1182 626 SUPERFAMILY Protein kinase-like (PK-like) 305 595 IPR011009 -
Tpr3g1182 626 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Tpr3g1182 626 Gene3D Phosphorylase Kinase; domain 1 299 399 - -
Tpr3g1182 626 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 148 607 - -
Tpr3g1182 626 Gene3D Transferase(Phosphotransferase) domain 1 400 603 - -
Tpr3g1182 626 PANTHER RUST RESISTANCE KINASE LR10-RELATED 148 607 IPR045874 GO:0004672
Tpr3g1182 626 SMART serkin_6 325 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1182 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1182 Tpr-Chr3 10669369 10672999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1182 314 607 Receptor kinase-like Gene Family AT5G38280 52.145 1.33e-100 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr3g1182 Pkinase 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1182 - - mtr:MTR_4g073220 803.897