Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1181 ATGCTCATGGTCAATGCAATGCTGCACAAGGTCAATAGGTCTACTTATTTGTTAGACCACCATGATGATGATTATCAGTCAGTCATGGCTATTTGGCTAAAAAACCTCATCCCTGTGTTCTTTTTTTGCTTCTTAACTACGGTTGCAGTTGCAGAAACTAGTTCCCATGATGATGACCAATGCAAAGAATCAAGTTGTGATGGTATTCATGGACCATTCATAAGATTCCCCTTCAGACTCAAAGGAAAACAGCCAAAATGGTGTGGCTATAATAATTCCTGGTTTGAGTTGTACTGCACCAACACCAACCAAACAGTGCTGAAACTCCCTTTTTCTTCTAAAACCATCATCAAAACTATAGATTACACTTCACAAATCATTACAGTGTCTTATCCTGAATTCTGCCTTCACAAACAAATTCCTAATTTCGACATATCCTCATCTCCCTTTCAGTTCAACTATGAATTTGGACTCAAAGAATATGCTTTATTCAATTGTTCAAAGACTTCTCAGAGAAACACAGATCACATAATAACATCTGGAAACTTTTCTTGTCTAAATGTTCCGGGATTTGAAGTTATAGCAGTGAATTCGGAATCATCAATAATCAGGACACCCTTGCTGTCCTGTACCAGAATCCAAAGCCTTGTATTGTTGCCTAATTCTTTGTTTAAAAGCAACGTTGATGCTGGTCTCAATTGGTTCCAACCAGACTGCAGAAACTGTGAACGAAAAGGCGGGCAATGCAAGGCCAAAAGAAACACATCTCAACACAAATTTAAATGTATAGGCATCCATAAAGGTTCATCAAAAGTGAAAGTGATTGCTGGTGGAATCATAGGCCCATTTTCTCTGATATTTGTTGGAGTCACAGCATATTGTATCTATGTAGCTTTCATTGAAAGGAAGCATTACATAAGAATCAAAAAGTTTTTGAAAGATTATAAAGCTCTTAAACCTTCCAGATACTCATATGGAGATATTAAAAGAATTACAAATCAGTTTAAGGAAGAACTGGGGCAGGGAGCTTTTGGTTCTGTCTTCAAAGGAAAGCTATCAAAGGAAGTTCAGGTAGCTGTTAAGGTCCTAAACACTTCAACAGGAAATGGCCAAGAGTTCATCAATGAAATGGAAGCAATGTGTCAAATTCACCACGTCAACGTGGCTCGCTTGGTTGGCTTTTGTGCAGACGGGAACAGACAAGCCTTGGTGTATGAATTTCTACCAAAAGGTTCGTTGCAGAAATTCATATCATCTGCAGACAATAAGGATGCCTTTTTAGGTTGGGAAAGGCTACAACACATTTCTCTCGGTATAGCTAAGGGAATTGAGTATCTTCATCAAGGTTGCGATAAACGAATTCTCCATTTTGATATCAAACCTCATAATGTATTGCTAGACGACAATTTCACACCCAAAATTTCTGATTTTGGTTTGGCCAAACTTTGTTCCAAGGAAAAAAGTAAAGTGTCAATGATCACGGCTAGGGGCACTTTGGGCTACATTGCACCAGAGGTATTTTCTAGGAACTTTGGCAATGTATCCTATAAGTCAGACATTTATAGTTATGGAATGATGCTTCTTGAAATGGTTGGAGGAAGGAAAGTAACCGATGTCACGGCCGAAAACAGCAACCAAGTTCACTATCCACAATGGATTTATAATCTTCTAGAGAACAATGAAGATATAAAAATCCACATTGAAGGAGAAGAAGACACTAGAATTGCCAAGAAGCTATCAATTGTGGGACTTTGGTGCATTCAGTGGCATCCGGCGAATCGTCCGACCATGAAGGCTGTTGTTCAAATGCTGGAAGGAAATGGTGAGAAGTTAGAGATGCCACCTAATCCTTTTGCCTCTGCATCGGCTACCAGAACAGGTGCTAGACATCTGAACTTGGAGCTAGATGTCATCTCAGAAATAGAGTGA 1929 0.3914 MLMVNAMLHKVNRSTYLLDHHDDDYQSVMAIWLKNLIPVFFFCFLTTVAVAETSSHDDDQCKESSCDGIHGPFIRFPFRLKGKQPKWCGYNNSWFELYCTNTNQTVLKLPFSSKTIIKTIDYTSQIITVSYPEFCLHKQIPNFDISSSPFQFNYEFGLKEYALFNCSKTSQRNTDHIITSGNFSCLNVPGFEVIAVNSESSIIRTPLLSCTRIQSLVLLPNSLFKSNVDAGLNWFQPDCRNCERKGGQCKAKRNTSQHKFKCIGIHKGSSKVKVIAGGIIGPFSLIFVGVTAYCIYVAFIERKHYIRIKKFLKDYKALKPSRYSYGDIKRITNQFKEELGQGAFGSVFKGKLSKEVQVAVKVLNTSTGNGQEFINEMEAMCQIHHVNVARLVGFCADGNRQALVYEFLPKGSLQKFISSADNKDAFLGWERLQHISLGIAKGIEYLHQGCDKRILHFDIKPHNVLLDDNFTPKISDFGLAKLCSKEKSKVSMITARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMMLLEMVGGRKVTDVTAENSNQVHYPQWIYNLLENNEDIKIHIEGEEDTRIAKKLSIVGLWCIQWHPANRPTMKAVVQMLEGNGEKLEMPPNPFASASATRTGARHLNLELDVISEIE* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1181 642 Pfam Protein kinase domain 335 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1181 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Tpr3g1181 642 Gene3D Phosphorylase Kinase; domain 1 297 407 - -
Tpr3g1181 642 SUPERFAMILY Protein kinase-like (PK-like) 318 605 IPR011009 -
Tpr3g1181 642 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Tpr3g1181 642 PANTHER RECEPTOR-LIKE KINASE 53 641 - -
Tpr3g1181 642 ProSiteProfiles Protein kinase domain profile. 333 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1181 642 Pfam Wall-associated receptor kinase galacturonan-binding 61 130 IPR025287 GO:0030247
Tpr3g1181 642 PANTHER RUST RESISTANCE KINASE LR10-RELATED 53 641 IPR045874 GO:0004672
Tpr3g1181 642 Gene3D Transferase(Phosphotransferase) domain 1 408 613 - -
Tpr3g1181 642 SMART serkin_6 333 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1181 Tpr-Chr3 10666240 10669438 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1181 238 626 Receptor kinase-like Gene Family AT1G66910 44.337 1.38e-109 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr3g1181 Pkinase 5.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1181 - - mtr:MTR_4g073230 1084.71