Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1180 ATGACTATGTCGTGTGTGGTACTAATCATTTTTGCTTTCTTTGTAATAATATTGACATGGTCTATTCACTTAGATGACCAATGCCCCATTCCATCAGAAGAACAGTGCGGAACGATATTCAACAAACCTTCATTCGATTCAATTGGAGTCGTACAGGAGTCATGTGTAAATCCCAGTTTCGAAGTAATATGTGAAAACAACAAATCGGTAATTTACTTCAACTATGGTGAACGTCACATAGACGCCATCCTAGTTTCTAATACATCATCTTCCTCTTTCCGTTACATAATGACCGGAGTCGGCCATAATAATAACTGCCTTAACATCAATTCAATTTCTCTTCCGTACGAAAACGTCTCATTCTTTTCCGATTATAGTTTGAGATACATGGTGGATCCTTATGTTCTTAAGTTTATATTGGTTATGAGATGCGAAAAACCGGTAGATAATCACTACTATTGGAATATTTCTTCAGAGACGTGTGGTGGTGGAATTGATGGTGAGGAAAAGCAATACTACTATTTATATGTTGGGTACGTAATATTCGAGTTGAGTTACATAGCAGAGTCATGCAGAATAGAGACGAAGGTAATGATAAGTGATTGGGATGAAAAGGTGATATGTAATGATACGAGTAAGTGTGAGTATCCAGAGAAGGTTCACACTGAGTATCTCAACGGAATTGAGCTTCGTTGGCGACCAACAAGCTGTGGGAAGCAGCAACACAGAGACAGTAAAGGAAAAAGGAAACCAGAATTGCCACTTCTCTGCATTCTCACCACCACACTCTTCGGTTTCACCCTACTCTCGCTGCCCCCGTGGATTGTTGGAAAATTTGTTCTTGGATCACCCTTTGTGGTTGTGTTCTTGATATTGAAATGGAGAAAAAAGCATCAGTCCATATATGACACAGTTGAAGATTTTATCCTAAGTCACAACAATTTCATGCCCATTAGATACTCTTACTCCCAAATCAGAACAATGACTAAATGTTTCGAGATTAAGTTGGGCGAAGGAGGCTATGGTTCTGTCTATGAAGGAGAGCTTCGAAGCAAACGCAAAGTAGCTGTTAAGGTATTGACTAAGTCTCAAACCAACGGACAAGACTTCATCAACGAAGTTGCGACAATTGGAAGAATTCGCCATGTCAATGTGGTGCAGCTAATCGGATTTTGTGCCGAAAGAACAAAGCAAGCTCTGATATATGAGTTCATGCCTAATGGTTCTCTTGATAAACACACATTTTCACAAGAGCAGGGAAACTCATCCACGTTAAGCTACGATAAAATCTATGACATTTCTCTTGGGATTGCTCGTGGAATTCAATACTTACATCAAGGCTGCGAAATGCAAATCATACATTTTGATATAAAACCACATAACATTCTTCTTGATGAGAATTTCAATCCGAAGTTATCTGACTTTGGTTTGGCAAAGTTGTACCGAATAGATCAAAGCATTTTGACATTAACAGCTGCAAGAGGAACAATGGGGTACATGGCTCCTGAGTTGCTGTACAAGAACATTGGAAACCTCTCTCACAAAGCTGATGTTTATAGTTTTGGAATGATGCTAATGGAAATGGCAGGAAGAAAAAAGAACAAAAATTATATAGAGAATTGTTGGCAAGACTATTTTGCTAAATGGATTTATGATCAATTTGAGGAAACAATAGATACAAACAATGGCACAGAGGAGGAAAAGAAAATTGCAATGAAGATGATTGTGATTGCGATGAAATGCATACAAATGAAACCAGATGATCGTCCCTCAATGAATGATGTGATAGAAATGCTCGAAGGAGATGAAGTGCCTCAACACCTTCCACCTGGTCCTGAATCTCTCTTAACCTGGCAAAGGATGTCAGCAGATGCAAATGAATTTGATGATAACTAG 1896 0.3871 MTMSCVVLIIFAFFVIILTWSIHLDDQCPIPSEEQCGTIFNKPSFDSIGVVQESCVNPSFEVICENNKSVIYFNYGERHIDAILVSNTSSSSFRYIMTGVGHNNNCLNINSISLPYENVSFFSDYSLRYMVDPYVLKFILVMRCEKPVDNHYYWNISSETCGGGIDGEEKQYYYLYVGYVIFELSYIAESCRIETKVMISDWDEKVICNDTSKCEYPEKVHTEYLNGIELRWRPTSCGKQQHRDSKGKRKPELPLLCILTTTLFGFTLLSLPPWIVGKFVLGSPFVVVFLILKWRKKHQSIYDTVEDFILSHNNFMPIRYSYSQIRTMTKCFEIKLGEGGYGSVYEGELRSKRKVAVKVLTKSQTNGQDFINEVATIGRIRHVNVVQLIGFCAERTKQALIYEFMPNGSLDKHTFSQEQGNSSTLSYDKIYDISLGIARGIQYLHQGCEMQIIHFDIKPHNILLDENFNPKLSDFGLAKLYRIDQSILTLTAARGTMGYMAPELLYKNIGNLSHKADVYSFGMMLMEMAGRKKNKNYIENCWQDYFAKWIYDQFEETIDTNNGTEEEKKIAMKMIVIAMKCIQMKPDDRPSMNDVIEMLEGDEVPQHLPPGPESLLTWQRMSADANEFDDN* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1180 631 SUPERFAMILY Protein kinase-like (PK-like) 310 600 IPR011009 -
Tpr3g1180 631 ProSiteProfiles Protein kinase domain profile. 330 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1180 631 Pfam Protein kinase domain 335 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1180 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Tpr3g1180 631 PANTHER RUST RESISTANCE KINASE LR10-RELATED 101 612 IPR045874 GO:0004672
Tpr3g1180 631 Gene3D Transferase(Phosphotransferase) domain 1 405 607 - -
Tpr3g1180 631 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 101 612 - -
Tpr3g1180 631 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Tpr3g1180 631 Gene3D Phosphorylase Kinase; domain 1 307 404 - -
Tpr3g1180 631 SMART serkin_6 330 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1180 Tpr-Chr3 10661691 10665308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1180 319 612 Receptor kinase-like Gene Family AT5G38280 50.495 4.59e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr3g1180 Pkinase 5.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1180 - - mtr:MTR_4g073220 825.469