Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1168 ATGGCAGTAGTAGCAGCTCCTAAGAAAACCAACTCAATCAACAAAAAAGATAACCCAAATCTTCTCTTAGGTCGTTTCGAATTAGGTAAACTCCTTGGCCATGGAACTTTCGCAAAAGTCCACCTTGCTAAGAACCTCAAAACAGGTGAATCAGTAGCAATTAAGATCATAAGCAAAGACAAAATCCTTAAAAGTGGTTTAGTTTCACACATCAAACGTGAAATCTCCATTCTTCGCCGTGTCAGACATCCTTACATAGTTCAACTTTTTGAAGTCATGGCTACAAAGACAAAGATCTATTTTGTTATGGAATATGTACGAGGTGGTGAACTTTTCAATAAGGTTGCTAAAGGTAGGTTAAAAGAAGAAGTTGCAAGAAAATATTTTCAACAATTGATTTGTGCTGTTGGATTTTGTCATGCTAGAGGTGTTTATCATAGAGATTTAAAACCTGAAAATTTGTTACTTGATGAAAATGGTAATCTTAAAGTTTCGGATTTTGGATTAAGTGCTGTGTCTGATGAAATTAAACAAGATGGGTTATTTCATACTTTTTGTGGTACACCTGCTTATGTTGCTCCTGAGGTTCTGTCTAGAAAAGGTTATGATGGTGCTAAGGTTGATATTTGGTCTTGTGGTGTTGTTTTGTTTGTTTTGATGGCTGGTTATTTACCTTTTCATGATCCTAATAATGTTATGGTTATGTATAAGAAGATTTATAAAGGTGATTTTAGATGTCCTAGATGGTTTTCGCCTGAACTTGTTAATCTTCTTACTAGGCTACTTGATATTAAGCCTCATACTAGGATTTCGATTCCGGAGATTATGGAGAATCGTTGGTTTAAGATAGGTTTCAAGAGTATTAAGTTTTATGTTGAGGATGATGTTGTTTGTAATGTTGATTCACTTGAACTTGATGATGGTGGTGGTGGTGATGGTGATAATAAGGTAGTGAATTTTGATGATCATCGTGATGAGGTGTTGGAATCAGTATCGGAATCGGAATGGGATCCTGAGGTTTTGAGTAGAAGGAATAACCGTGCTCGTTCTTTGATGCCAAGGCCTGCGAGTTTGAATGCTTTTGATATTATATCGTTTTCGCAAGGTTTTGATCTTTCGGGATTGTTTGAGGAGAAGGGCGATGAAGCAAGGTTTGTGTCTAGTGCATCAGTGCCGAAGATTCTATCGAAATTGGAGGAAGTTGCTCAATTGGTTCAGTTCAATGTAAGGAAGAAAGATTGCCGGGTTAGCTTGGAGGGTTCTAGAGAAGGGGCAAAAGGGCCATTGACTATTGCTGCCGAGGTATTTGAATTGACGTCTTCTTTGGTGGTGGTGGAAGTGAAGAAAAAAGGAGGGGATAGGGTAGAATATGAGAAATTTTTAAACACTGAATTGAAGCCGGCTTTGCATAGTTTAACCGTGGAGGAATCTGCAGGTTCTTCAAGTCAAACAATACCAGATGAATCTTTGCAGCACCGCGCATTTTCTGATTCTGCCATTGACAAACATTCAGATGGTATTGAAGCTCTCAACTTAGATACCTGA 1545 0.3799 MAVVAAPKKTNSINKKDNPNLLLGRFELGKLLGHGTFAKVHLAKNLKTGESVAIKIISKDKILKSGLVSHIKREISILRRVRHPYIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLICAVGFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDEIKQDGLFHTFCGTPAYVAPEVLSRKGYDGAKVDIWSCGVVLFVLMAGYLPFHDPNNVMVMYKKIYKGDFRCPRWFSPELVNLLTRLLDIKPHTRISIPEIMENRWFKIGFKSIKFYVEDDVVCNVDSLELDDGGGGDGDNKVVNFDDHRDEVLESVSESEWDPEVLSRRNNRARSLMPRPASLNAFDIISFSQGFDLSGLFEEKGDEARFVSSASVPKILSKLEEVAQLVQFNVRKKDCRVSLEGSREGAKGPLTIAAEVFELTSSLVVVEVKKKGGDRVEYEKFLNTELKPALHSLTVEESAGSSSQTIPDESLQHRAFSDSAIDKHSDGIEALNLDT* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1168 514 PANTHER - 8 480 - -
Tpr3g1168 514 Gene3D Transferase(Phosphotransferase) domain 1 16 305 - -
Tpr3g1168 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Tpr3g1168 514 Gene3D Kinase associated domain 1, KA1 353 473 - -
Tpr3g1168 514 SUPERFAMILY Protein kinase-like (PK-like) 22 282 IPR011009 -
Tpr3g1168 514 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1168 514 Pfam NAF domain 355 411 IPR004041 GO:0007165
Tpr3g1168 514 ProSiteProfiles NAF domain profile. 353 377 IPR018451 GO:0007165
Tpr3g1168 514 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Tpr3g1168 514 CDD CIPK_C 359 469 - -
Tpr3g1168 514 SMART serkin_6 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1168 514 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 19 8 480 - -
Tpr3g1168 514 ProSiteProfiles Protein kinase domain profile. 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1168 Tpr-Chr3 10571466 10573339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1168 8 476 CBL-interacting serine-threonine protein kinases AT4G18700 72.727 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tpr3g1168 Pkinase 3.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1168 - - gmx:100786078 732.635