Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1167 ATGGAATGTATATGCGATCGATTTGGATTTTGGCTCAGGATTTATGTTGGATTGATTTCTCTTTGGACAATTCGATTGTGCTGGGCCCTGAATGATGAAGGAATTGCTTTGTTGGAATTTCGAGAAAGAATAACTTCTGATCCTCATGGGGCTCTGATAAATTGGGATCCAAATGATTCCGACCCTTGCAAGTGGTGGGGTGTTCGTTGTGTTGATGGTAAAGTGCAAATCCTGGACCTAAATGGGCTATCATTGGAAGGGGAATTAACTCCTCGTCTTGGGAAACTTAGTCACTTAAAGTCTCTTGTGCTATGCAAGAACAATTTTTCTGGCACCATTCCCAAAGAACTTGGAGATCTAGAAAATCTTGAGTTGTTGGATTTAAGGGAGAATAACTTAACTGGAAATATCCCATCAGAAATTGGCAGGTTGTTGTTGTTAAAACAATTGTTGGTTCATCACAACAAAATTGAAGGCAGTGATTCTCTAGAGCTTGGGAACATGCCTTCTAAATCACTAATTATTGACAACTATTCATCACCTCTGCCAAGTTTATCTCACTGCAAGCATAGAAAGTTTGCACACTGCTTGTGGTATAGAGATTTCAAGCAATTGAACAAGGTAGATTCTTTGGCTGTTCCAATTAAAGGAGCACTTAAAAGATACTTTAATGCCATGGCACTGCCATTGTTCAAGCTAGGAAAGGCTACCTCTGGCTATGAAGAGACTTATTGTGCCGGCCTTCCTAGTACTGACGAGTCGGAGGTTGACCCAAATTTATCAAATCTAATCAGTTCTGCACGTCGTAAGTTGCTTGATCAGTCCAGTAACCTTGCAGCTGCACCTTATAGTGGACCTGCTATACAGATCAGTAATCTCCCAATTACCATAAGTTGTGGATCTTTCCCAGCTGTGCCAGATGCCAGTAAGAAACAAAATCAGTCAGCTGCACCGTTAGATCCACCTACTGTTTCTCCACCACATGATAATGAAATAAGTCAACCAAATTCAGATAGTGGTGCTCCAAGTGGTGCTCCAAGTAAACTCTGGAAATATATTATCATTATCTCTGGTGTGGTTTTCTTGGTCCTTTTTATTGTGCTCATACTTTGCATCTATCGAAAACGAGCTGCAAAAGTAATAAAGCCCTGGAAGACAGGAATAAGTGGACAGTTGCAGAAAGCATTTGTAACAGGGGTCCCCAAGTTGAATCGATCGGAGTTGGAAACAGCCTGTGAAGATTTCAGCAATATCATTAACAGTTTTGAGAAGTGCACCGTATATAAAGGAACACTGTCCAGTGGAGTTGAGATTGCTGTTGATTCTACTATTGTTACTTCTGCCGATGAGTGGTCAAAGAACATGGAAATGGCCTATAGGAGAAAGATTGCTGCTCTATCCCGTGTTAACCATAAGAACTTTACCAATCTTATTGGTTACTGTGACGAAGAAGAACCACTCACAAGGATGATGGTGTTTGAGTATGCTCCAAATGGAAGCTTATTCGAGCATCTACATGTTAAAGAAGTTGAACATCTTGATTGGAGTGCAAGGGTGAGGGTTATCATGGGTACAGCTTATTGTCTTCAATACATGCACCATGATCTGAATCCACCAGTATCTCATTCCCACCTTAGTTCAGTTTCTATATTATTAACAGACGACTTTGCTGCTAAGATTTCCGAGATCAGTTTCGGCAACAACAGAGTATCAAAATCCAGCACAAGTGGAGACGACTCAAAGAAATCCGAGTTGCCACCGCAACAAGGTCCTGAAACCGATGTCTATAACTTTGGAGTATTGTTACTTGAAATCATTTCTGCGAAACTGCCTTACTCTGAAGAACAAGGTCACCTTGTAAACTGGGCCTCTGAGTACTTGAATGATAAGCGAAATTTCGGCTGTTTGATCGATCCCACGCTCGAGTCCTTTAAAGACAACGAACTTGATGTCATATGTGAGGTGATAAAAGAATGCATTCAATCTGATCCAAGGTTAAGACCAACAATGCAGGAAATAACTTGCAAATTGAGAGAAGTGCTTAATATATCGCCCGAGCAAGCAGTTCCGAGACTTTCTCCGCTCTGGTGGGCTGAATTGGAGATCTTATCAGTGGAAGCCACTTAA 2127 0.4118 MECICDRFGFWLRIYVGLISLWTIRLCWALNDEGIALLEFRERITSDPHGALINWDPNDSDPCKWWGVRCVDGKVQILDLNGLSLEGELTPRLGKLSHLKSLVLCKNNFSGTIPKELGDLENLELLDLRENNLTGNIPSEIGRLLLLKQLLVHHNKIEGSDSLELGNMPSKSLIIDNYSSPLPSLSHCKHRKFAHCLWYRDFKQLNKVDSLAVPIKGALKRYFNAMALPLFKLGKATSGYEETYCAGLPSTDESEVDPNLSNLISSARRKLLDQSSNLAAAPYSGPAIQISNLPITISCGSFPAVPDASKKQNQSAAPLDPPTVSPPHDNEISQPNSDSGAPSGAPSKLWKYIIIISGVVFLVLFIVLILCIYRKRAAKVIKPWKTGISGQLQKAFVTGVPKLNRSELETACEDFSNIINSFEKCTVYKGTLSSGVEIAVDSTIVTSADEWSKNMEMAYRRKIAALSRVNHKNFTNLIGYCDEEEPLTRMMVFEYAPNGSLFEHLHVKEVEHLDWSARVRVIMGTAYCLQYMHHDLNPPVSHSHLSSVSILLTDDFAAKISEISFGNNRVSKSSTSGDDSKKSELPPQQGPETDVYNFGVLLLEIISAKLPYSEEQGHLVNWASEYLNDKRNFGCLIDPTLESFKDNELDVICEVIKECIQSDPRLRPTMQEITCKLREVLNISPEQAVPRLSPLWWAELEILSVEAT* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1167 708 Gene3D Transferase(Phosphotransferase) domain 1 496 689 - -
Tpr3g1167 708 SUPERFAMILY L domain-like 28 185 - -
Tpr3g1167 708 Gene3D Phosphorylase Kinase; domain 1 382 495 - -
Tpr3g1167 708 SUPERFAMILY Protein kinase-like (PK-like) 398 675 IPR011009 -
Tpr3g1167 708 Pfam Protein tyrosine and serine/threonine kinase 425 677 IPR001245 GO:0004672|GO:0006468
Tpr3g1167 708 Gene3D Ribonuclease Inhibitor 29 215 IPR032675 -
Tpr3g1167 708 MobiDBLite consensus disorder prediction 310 340 - -
Tpr3g1167 708 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Tpr3g1167 708 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Tpr3g1167 708 PANTHER LRR RECEPTOR-LIKE KINASE 1 708 - -
Tpr3g1167 708 ProSiteProfiles Protein kinase domain profile. 413 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1167 708 PANTHER PROTEIN MALE DISCOVERER 2 1 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1167 Tpr-Chr3 10564518 10569888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1167 85 680 Receptor kinase-like Gene Family AT5G56040 25.688 2.64e-44 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Tpr3g1167 PK_Tyr_Ser-Thr 4.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1167 - - gmx:100808098 967.222