Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1163 ATGAAACCCTTTTACATATTCTTGATTCTCCTAACCTTATTTTCTTCAGTACAATCTTCATGCAAAACTAAAGACCAAAAATTAATTTCAAAAGCTTTCAAATCTGTCTCTTGGTTCAACTCTTCCACCTTCACATGTTCAGAGTCTCATATCACCAAAATAATTCTTCCCTCCAAAAATCTAACCGGAACAATTTCATGGGGTTACCTCAAAAACATGTCAAAGTTACAAATTCTTGATCTTTCTGGAAATTCTCTACAAGGCCACGTACCAACCTGGTTTTGGTCTGGTTTTTCATCTTTATTGGAAGTGAATCTCTCAAGAAACAAATTCGGAGGAAGGATCAATAACACCTCGTTTTCAATTTCAACCATTCAAAAACTTAATCTCTCACACAACAGGTTCAGCAACATAGTTCAACTTTCTACCTTCCAAAACCTTAAAATCCTCGACCTTTCAGACAACAACCTAAGAACACTTCCTTTAGGTTTTCAAAATCTCACCAAACTACAACACCTTGATCTTTCTAGCTGCAATCTCAATGATAACATAAAACCCATTTCTTCTTTACACACACTTCATTACTTAGATTTATCAAACAACAATTTAACCGGTAATTTCCCTTCTGATTTTCCACCACTTAAAAATCTTAAATTTCTCAACATTTCAAACAACAACTTCATCTATAACAACAAGACTCCAAACCAAAATCAAAATCAAGTCATCATTCATAGAAAAAAACAAACCAAACCCAAATCAAAAAAATTGATTCTTGCAATATGTTCTGCATTATCAACACTTGTTCTGGCTATAATTTCCATTTGGGTAATCCTAATTATTCACAAAAAGATGAAACAACGTTCTAAGATGAAGAAGTGGGCAATTTCATTACCAGTTATGATGAACACGATGAACACAAAGGTAGAGAAAACAGGGCCGTTTGAATTTGAAACAGAGTCAGGTTCAACATGGGTTGCAGATGTGAAAGAACCAACATCTGCACCAGTTGTGATGTTTGAGAAGCCATTGATGAACTTCACTTTCAAGGATCTCATCATTGCCACGTCACATTTCGGGAAAGAATCGCAGTTGGCAGAAGGAAGGTGTGGCCCTGTGTATTGGGCTGTTTTACCTGGTGAACTCCACGTGGCAATTAAGGTTCTTGAACATGCGAGAGACGTTGATTATGATGACTCTGTTGCTATGTTCGTTGACTTGGCGAAGTTGAAGCATCCTAATTTGTTGACTCTCTCTGGTTACTGTATTGCAGGTAAGGAAAAGTTGGTGCTATACGAGTTTATGGCAAACGGCGATTTAGGTCGATGGCTACATGAGCTTCCAACAGGGGATACCAATGTTGAGGATTGGACTGATGACACATGGGAGTTGCAAACCGGTGTGGTGGAAGCATCCCCGAAAATGATGGGTTGGTTGACACGCCACCGTATCGCGGTGGGCATAGCGCGTGGCCTTGCATATCTCCATCATGCGAGTTCAAAACCTATTGTGCACGGACACCTTGTCACCTCCAACATTTTGCTTACTGATGATTTTGAGCCTCGAATCTCCGATTTTGGATTGCAAATCAACTCAAGTTCCAATGGCGGGACAAAGGATGATGTGTACTGCTTTGGAGTGGTGTTGATTGAGCTGCTTACCGGGAGGGTTGGCACAACTGAGACAATTATTGTTGCTAGAAAGGCAGTGAAGGAGGAACAACACGTTAGAGTGCTTGATGAGAGGTTGCTACTCGAAGGTGATTCAATGGTGAGCGAGATGGTGGAGAGCCTCATAATCGGTTTTTTGTGCACGGCTGAGTCGCCTTCCAAGAGACCCACCATGCAACAAGTTTTGGGATTACTCAAAGATATTCATCCTCATGAACCATCATTCTAA 1896 0.4008 MKPFYIFLILLTLFSSVQSSCKTKDQKLISKAFKSVSWFNSSTFTCSESHITKIILPSKNLTGTISWGYLKNMSKLQILDLSGNSLQGHVPTWFWSGFSSLLEVNLSRNKFGGRINNTSFSISTIQKLNLSHNRFSNIVQLSTFQNLKILDLSDNNLRTLPLGFQNLTKLQHLDLSSCNLNDNIKPISSLHTLHYLDLSNNNLTGNFPSDFPPLKNLKFLNISNNNFIYNNKTPNQNQNQVIIHRKKQTKPKSKKLILAICSALSTLVLAIISIWVILIIHKKMKQRSKMKKWAISLPVMMNTMNTKVEKTGPFEFETESGSTWVADVKEPTSAPVVMFEKPLMNFTFKDLIIATSHFGKESQLAEGRCGPVYWAVLPGELHVAIKVLEHARDVDYDDSVAMFVDLAKLKHPNLLTLSGYCIAGKEKLVLYEFMANGDLGRWLHELPTGDTNVEDWTDDTWELQTGVVEASPKMMGWLTRHRIAVGIARGLAYLHHASSKPIVHGHLVTSNILLTDDFEPRISDFGLQINSSSNGGTKDDVYCFGVVLIELLTGRVGTTETIIVARKAVKEEQHVRVLDERLLLEGDSMVSEMVESLIIGFLCTAESPSKRPTMQQVLGLLKDIHPHEPSF* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1163 631 Gene3D Transferase(Phosphotransferase) domain 1 434 533 - -
Tpr3g1163 631 SMART LRR_typ_2 144 166 IPR003591 -
Tpr3g1163 631 SMART LRR_typ_2 167 191 IPR003591 -
Tpr3g1163 631 SMART LRR_typ_2 73 96 IPR003591 -
Tpr3g1163 631 Pfam Leucine Rich Repeat 193 211 IPR001611 GO:0005515
Tpr3g1163 631 Gene3D Ribonuclease Inhibitor 121 242 IPR032675 -
Tpr3g1163 631 Gene3D Phosphorylase Kinase; domain 1 318 433 - -
Tpr3g1163 631 PANTHER KINASE, PUTATIVE-RELATED 3 227 - -
Tpr3g1163 631 PANTHER KINASE, PUTATIVE-RELATED 237 627 - -
Tpr3g1163 631 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 227 - -
Tpr3g1163 631 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 237 627 - -
Tpr3g1163 631 Pfam Protein tyrosine and serine/threonine kinase 361 531 IPR001245 GO:0004672|GO:0006468
Tpr3g1163 631 ProSiteProfiles Leucine-rich repeat profile. 146 168 IPR001611 GO:0005515
Tpr3g1163 631 ProSiteProfiles Leucine-rich repeat profile. 124 145 IPR001611 GO:0005515
Tpr3g1163 631 SUPERFAMILY L domain-like 41 230 - -
Tpr3g1163 631 SUPERFAMILY Protein kinase-like (PK-like) 336 624 IPR011009 -
Tpr3g1163 631 Pfam Leucine rich repeat 124 180 IPR001611 GO:0005515
Tpr3g1163 631 Pfam Leucine rich repeat 50 111 IPR001611 GO:0005515
Tpr3g1163 631 Gene3D Ribonuclease Inhibitor 10 120 IPR032675 -
Tpr3g1163 631 ProSiteProfiles Protein kinase domain profile. 358 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1163 631 Gene3D Transferase(Phosphotransferase) domain 1 534 626 - -
Tpr3g1163 631 PRINTS Leucine-rich repeat signature 147 160 - -
Tpr3g1163 631 PRINTS Leucine-rich repeat signature 190 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1163 Tpr-Chr3 10517745 10520840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1163 51 624 Receptor kinase-like Gene Family AT5G07280 31.419 6.27e-73 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Tpr3g1163 PK_Tyr_Ser-Thr 1.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1163 - - gmx:100809704 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1163 3 10517745 10520840 Tpr7g2942 7 36687293 36691507 PCT