Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1149 ATGATGGGAAGCCAAGATGTGAAGTTGGTGAGCTTTTGGGTTAGTCCATTTGCTAAGAGAGTTGAATGGGCCTTGAAACTAAAGGGTGTTGATTATGAGTATGTAGAAAAAGATATCTTCAATAAAAGCACTCTCCTTTTGGAATTGAACCCGGTTCACAAGTCGGTTCCGGTTCTTGTTCATGCTCAAAAACCAATTGCAGAGTCATTGATTATCCTTGAATACATTGATGAAACATGGAAGCAATATCCACTTTTACCTTGCCATCCTTATCAAAGAGCTTTTGCTCGTTTTTGGGCTAATTTTGGTGAACAAAAGCTTTTGGATGTAGCATGGATTGCAATGTGTAGTAATGGAGACGAACAGGAAAAGGCTATAAAGCTAGCCAGAGAAGCAATAGAGAAGATAGAAGATGAGATTAAGGGGAAGAAATTCTTTGGAGGGGACACTATTGGATACCTTGATCTTGCTCTTGGATGGATATCTTACTGGCTTCCAATTTGGGAAGAAGTTGGGTCAATGCAGGTACTTGACCCATTGAAATGTTCAGCTATCACTGCATGGATGACAAATTTTCTCAGCCACCCTGTGATTAAGGACAGCTTGCCCCCAAGAGACAGGATGCTTGTTTACTTCCACACTCGCAGAGAGACATTGTCTGAGGCATTTCATGGCTGGTTCAAAGTTTAG 690 0.4116 MMGSQDVKLVSFWVSPFAKRVEWALKLKGVDYEYVEKDIFNKSTLLLELNPVHKSVPVLVHAQKPIAESLIILEYIDETWKQYPLLPCHPYQRAFARFWANFGEQKLLDVAWIAMCSNGDEQEKAIKLAREAIEKIEDEIKGKKFFGGDTIGYLDLALGWISYWLPIWEEVGSMQVLDPLKCSAITAWMTNFLSHPVIKDSLPPRDRMLVYFHTRRETLSEAFHGWFKV* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1149 229 PANTHER GLUTATHIONE S-TRANSFERASE 2 220 - -
Tpr3g1149 229 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Tpr3g1149 229 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 2 220 IPR045073 -
Tpr3g1149 229 Gene3D Glutaredoxin 2 85 - -
Tpr3g1149 229 SUPERFAMILY Thioredoxin-like 6 106 IPR036249 -
Tpr3g1149 229 Coils Coil 119 139 - -
Tpr3g1149 229 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Tpr3g1149 229 SFLD Glutathione Transferase (cytosolic) 3 220 IPR040079 -
Tpr3g1149 229 SUPERFAMILY GST C-terminal domain-like 78 217 IPR036282 -
Tpr3g1149 229 SFLD Main.3: Omega- and Tau-like 3 220 IPR045073 -
Tpr3g1149 229 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 212 IPR010987 -
Tpr3g1149 229 CDD GST_C_Tau 90 212 IPR045074 GO:0004364|GO:0006749
Tpr3g1149 229 CDD GST_N_Tau 7 80 - -
Tpr3g1149 229 Gene3D - 86 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1149 Tpr-Chr3 10369200 10369889 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1149 3 220 Glutathione S-transferase Gene Family AT2G29420 44.954 2.00e-69 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1149 K00799 - gmx:547583 370.933