Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1142 ATGATGAAGTGGGGTGGAAGAAAATCTTCTTCAGCTTCTTCTTCTAAACATTCCTTCATCTCTCATGTATCTCCTTTTTCATGGCTATCAAAGTTCAAGCAAATGAAAATTGACTCGGACTCGAAGGCAAAACTTGAAAAGCGGAAGCAGAACACCCCATCTGAAAATAGTTCATCACAGTTTCCTTGTGGGAGCAGAGGAAAGTTTTATGGAGGTGGCGATGACGATGCTTTCTGGAGATTATCATTTGGTGAAGAGATTACTAATGAGCAAAAGAAGAAAAATGAAGATAATATGAAGCCTACTATGTACAATTTGGATACCAAAAGACATGGAAGAAGTAGAAGAAGAGAAGATAGAAAATTGCTGAATGAAACAAAGAGTACAAAGGAACTTGAATACTTAAAGAGGAGATATGAGAGAAAAGAACAAAGAGTTTTACAAGATAAGCTCTTGAAGTTAGAGAATGCAACAGAAGAAGCTGAATTTGCATCAAGCAAATGTAAATTCTTAGAAAAAGATGAGGTTCAATTTGAATCACCGAGTACCTACTTATTTTCTTCTTCTGTAGATGCTGAAAGTTCTGACCTTGGCCTTGGAAGTATAAGAGAAAATGGTGTGAAACAAAGTGAGGAGTTTAAAGCAAAGGATAACAAAAAAAGGGAATCAGTTCATGTGAGCAGAGAAATCCAGAGGAGGAAACCAAAGCACAGTTCGAAGGTAAGAGTGCATTCTCCAAGGATGGCTGCAAAAGTTGAAATATGCAAAATAAAGGCGATACAAGACAAAAAGAAAGCAAAACTAAAGATGAAGAAAGAAGAGGAAACAGAAGAAGGGTTAGATAGCTTTGCTGTTGTGAAGTGTTCTTTGGATCCACAACAAGATTTTAGAGATTCAATGATTGAGATGATCAAAGAGAAACAGATAAGTCAGCCAGAAGAAATGGAAGAGCTGTTAGCATGTTATTTGAGTTTGAATTCTAATGAATATCATGATCTCATTATCAAAGCTTTCCGGCAGATGCCAGACTCATCGCTTAATTAG 1044 0.3659 MMKWGGRKSSSASSSKHSFISHVSPFSWLSKFKQMKIDSDSKAKLEKRKQNTPSENSSSQFPCGSRGKFYGGGDDDAFWRLSFGEEITNEQKKKNEDNMKPTMYNLDTKRHGRSRRREDRKLLNETKSTKELEYLKRRYERKEQRVLQDKLLKLENATEEAEFASSKCKFLEKDEVQFESPSTYLFSSSVDAESSDLGLGSIRENGVKQSEEFKAKDNKKRESVHVSREIQRRKPKHSSKVRVHSPRMAAKVEICKIKAIQDKKKAKLKMKKEEETEEGLDSFAVVKCSLDPQQDFRDSMIEMIKEKQISQPEEMEELLACYLSLNSNEYHDLIIKAFRQMPDSSLN* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1142 347 Coils Coil 147 174 - -
Tpr3g1142 347 MobiDBLite consensus disorder prediction 201 243 - -
Tpr3g1142 347 ProSiteProfiles OVATE domain profile. 285 344 IPR006458 -
Tpr3g1142 347 MobiDBLite consensus disorder prediction 89 125 - -
Tpr3g1142 347 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 9 340 IPR038933 GO:0045892
Tpr3g1142 347 MobiDBLite consensus disorder prediction 207 229 - -
Tpr3g1142 347 MobiDBLite consensus disorder prediction 1 20 - -
Tpr3g1142 347 Coils Coil 257 277 - -
Tpr3g1142 347 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 284 340 IPR006458 -
Tpr3g1142 347 Pfam Transcriptional repressor, ovate 289 340 IPR006458 -
Tpr3g1142 347 PANTHER TRANSCRIPTION REPRESSOR OFP4 9 340 - -
Tpr3g1142 347 MobiDBLite consensus disorder prediction 39 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1142 Tpr-Chr3 10341070 10342843 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tpr3g1142 Ovate 2.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1142 - - mtr:MTR_8g087530 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1142 3 10341070 10342843 Tpr7g2905 7 36339719 36340747 PCT