Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1127 ATGGATGAAAATTCAACTACCAATGGAACCAATGAAGTTGTTTTGAACATAAACAATGATGTCCCTAACAAGAGTGAAGACTCAAGCTCCTATGCCACTGCTTCTTTCTTGCAAAAGTTGGTAGCTGAGGTGGTAGGCACATATTTCTTGATATTTGCCGGTTGTGCTGCTGTCGCGGTGAACAAGAACAACGATAACGTGGTGACGCTTCCCGGAATTTCAATTGTTTGGGGACTTGCTGTAATGGTGTTAGTTTACTCTCTTGGTCATATCTCTGGTGCTCATTTCAATCCTGCAGTTACCATTGCTTTTGCTACCACAAGAAGGTTTCCCTTAAAACAGGTTCCAGCTTATGTAGCAGCTCAAGTCCTTGGATCTACACTTGCAAGTGGAACTCTTAGACTATTATTTAGTGGCAAAGATGATCAATTTGTAGGAACACTTGCAGCTGGGTCTAATCTTCAAGCTTTTGTGATTGAATTCATAATCACTTTTTATCTTATGTTTATCATTTCTGGAGTTGCCACTGATAATAGAGCAATTGGTGAATTGGCTGGTATTGCTGTTGGATCTACAGTACTTTTGAATGTGATGTTTGCAGGGCCAATTACAGGAGCATCAATGAATCCAGCAAGAAGTATAGGACCTGCAATTGTACACAATGAATACAAAGGAATATGGATATACTTAGTGTCTCCAATTCTAGGAGCCGTGGCCGGTGCATGGGTTTATAACGTAATTCGGTACACCGATAAGCCGGTTCGTGAGATCACCAAGAGTGCATCTTTCCTCAAAGCAGCAAAGCCATAG 810 0.4123 MDENSTTNGTNEVVLNINNDVPNKSEDSSSYATASFLQKLVAEVVGTYFLIFAGCAAVAVNKNNDNVVTLPGISIVWGLAVMVLVYSLGHISGAHFNPAVTIAFATTRRFPLKQVPAYVAAQVLGSTLASGTLRLLFSGKDDQFVGTLAAGSNLQAFVIEFIITFYLMFIISGVATDNRAIGELAGIAVGSTVLLNVMFAGPITGASMNPARSIGPAIVHNEYKGIWIYLVSPILGAVAGAWVYNVIRYTDKPVREITKSASFLKAAKP* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1127 269 CDD MIP 38 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr3g1127 269 Gene3D Glycerol uptake facilitator protein. 2 259 IPR023271 -
Tpr3g1127 269 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr3g1127 269 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr3g1127 269 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr3g1127 269 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr3g1127 269 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr3g1127 269 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr3g1127 269 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 267 - -
Tpr3g1127 269 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Tpr3g1127 269 PANTHER AQUAPORIN NIP2-1 1 267 IPR034294 -
Tpr3g1127 269 SUPERFAMILY Aquaporin-like 33 258 IPR023271 -
Tpr3g1127 269 TIGRFAM MIP: MIP family channel proteins 42 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr3g1127 269 Pfam Major intrinsic protein 33 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1127 Tpr-Chr3 10259631 10262328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1127 28 269 Major Intrinsic Protein MIP AT5G37810 60.331 5.47e-107 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1127 K09874 - gmx:100798526 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1127 3 10259631 10262328 Tpr7g2897 7 36267353 36269568 PCT