Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1113 ATGCAAGGGAACAATCATTGTCCTCCTTTAACACCAAGGTCGAGATTGGAAAGGCTTTTGAGAGAAAGAGAGGTGAGGAAATCAAGTCGGTATACTCAATCGACTGAGGACGGAAGAGATGGCAACAAAGAGGGAGAACAGCTTTATAATGATTCATTCTTCGTAAGTGAGAACGGTAATGAGGAAGAGTTGGCGGAAACGGGGTTTGCAGATGATAGGCCTCGCAAACAACGTTTGTTGGTGGTAGCTAACAGGTTGCCTGTCTCTGCTGTTAGGGAGGGTGTGGATTCATATCACCTTGAGATCAGTGTTGGCGGCCTTGTCAGTGCACTTTTAGGTGTAAAGGAGTTTGACACCAGATGGATTGGTTGGGCTGGTGTGAATGTCCCTGATGAAGTTGGGCAGAAAGCTTTGACTAAAGCTTTAGCTGAAATGCGATGCATCCCAGTATTTCTTGACGAAGATATAGTTAATGAGTACTACAATGGTTATTGCAACAACATCTTGTGGCCACTATTTCATTACCTTGGACTTCCACAAGAGGACAGGCTTGCTACCACGCGAAGTTTCCAAACTCAATTTGATGCGTATAAGAAGGCGAACCAAATGTTTGCTGATGTAGTGAATCAGCATTATCAGGATGGAGATGTTGTTTGGTGCCATGATTATCACCTAATGTTTCTTCCAAGATGTTTGAAAGAATACAATGAAAAAATGAAAGTTGGATGGTTTCTCCATACGCCTTTTCCTTCCTCAGAAATACATAGGACTCTGCCGTCCAGATCAGAGCTGTTGAGATCTGTACTTGCCGCTGATTTGGTGGGATTCCATACTTACGATTATGCGAGGCATTTTGTTAGTGCTTGTACTCGAATTCTTGGGATAGAAGGTACACCTGAGGGAGTAGAAGATCAAGGGAGGCTAACCCGTGTGGCTGCGTTTCCTATTGGAATTGACTCTGAAAGATTTATTCGAGCCCTTGCGCTTCCTGAAGTCCAGACTCACATGAAGGAATTGAAAGAAAGATTTGCAGGCCGAAAGGTAATGTTGGGTGTTGATCGTCTTGATATGATAAAAGGAATTCCTCAGAAAATCTTGGCATTTGAGAAGTTTCTTGAGGAGAATTCTCATTGGCATGATAAAGTTGTGCTGCTGCAAATTGCTGTACCTTCAAGGACAGATTGTCCTGAATATCAAAAGCTTACGAGCCAGGTACATGAAATTGTAGGACGCATCAATGGAAGATTCGGAACACTTACCGCTGTCCCAATACACCATCTGGATCGGTCACTTGACTTTCATGCATTATGTGCACTCTATGCTGTTACTGATGTAGCACTTGTTACATCACTAAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTTGCATGTCAAGCTTCCAAGAAGGGGGTTCTCATTTTAAGTGAGTTTGCAGGTGCAGCACAGTCTCTTGGTGCTGGTGCAATCTTGGTAAATCCATGGAACATCACCGAGGTTGCTGCTTCTATTGGTTATGCTTTGGATATGCCAGCCGATGAAAGAGAAAAACGGCATCAGTTTAATTTCAAGCATGTGACAACTCACACGTCACAAGAATGGGCTGCAACTTTTGTGAGTGAACTGAATGATACTATTGTTGAAGCTCAGCTTAGAACAAGACAAATTCCTCCATTACTTCCTAATAAAGTAGCAGTTGATTGTTTCTCAAAATCCAATAACAGATTAATTATACTGGGTTTCAATGCCACTCTGACTGAACCAGTGGATGCTCTTGGAAGGGGTGATCAGATTAAAGAACTGGAACTAAAAGTGCATCCAGATCTGAAGGAACCTTTAAAGAAATTATCCGATGATCCAAAGACAACAATAGTTGTTCTGAGTGGGAGTGGTAGAGCTGTCTTGGACAAAAACTTTGGTGAATACAATATGTGGCTGGCAGCAGAAAATGGGATGTTTTTGCGACTTACTTCAAGTGAATGGATGACAACTATGCCTGAAAATTTAAATATGGACTGGGTTGATAGTGTAAAGCATGTTTTTGAGTATTTTACTGAAAGAACCCCACGGTCTCATTTTGAGCTACGCGAAACTTCAATTATATGGAACTATAAATATGCAGATGTTGAGTTTGGAAGGCTTCAAGCAAGAGATCTGCTTCAGCATCTTTGGACGGGGCCAATATCAAATGCATCTCTTGATGTTTTCCAAGGTGGTCGGTCTGTTGAGGTCCGTGCAGTTGGTGTGTCAAAGGGAGCAGCTATCGACCGTATCCTGGGAGAGATAGTTCATAACAAGGGCATGAAGGAACCGATCGATTATGTCCTATGCATTGGACACTTTCTATCAAAGGATGAAGATGTCTATAAATTTTTTGAGCCAGAGCTCCCTACGGAATCATCTCCAATGGCAAAAGCTATGCTGTCCAATTCTTACAGGCCATCATCTCTGCCAAGATTTTCATCCAGCAAAAGTGGCTCTAAAGCATCTCACTATAAGAAGCAACGTTCACTGTCAAATCTAGAAAGGAGAGCCATTGAGCGCACAACTAGTGATCCTTGGAGACCACCAGGCCGTGATAGAATGTCGCTGTATGAGGGTTCATCAGTTCTTGATCTTAAAGGTGATAATTACTTCTCTTGTGCTGTTTCACGAAAGAGATCAAGTGCCCGCTACCTTCTTAAAACCTCACATGATATTGTCAATCTCTTAAGTGACCTGGCAGATCGTTCTTCATCACCACCAACTTGA 2751 0.4242 MQGNNHCPPLTPRSRLERLLREREVRKSSRYTQSTEDGRDGNKEGEQLYNDSFFVSENGNEEELAETGFADDRPRKQRLLVVANRLPVSAVREGVDSYHLEISVGGLVSALLGVKEFDTRWIGWAGVNVPDEVGQKALTKALAEMRCIPVFLDEDIVNEYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQTQFDAYKKANQMFADVVNQHYQDGDVVWCHDYHLMFLPRCLKEYNEKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGIEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALALPEVQTHMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENSHWHDKVVLLQIAVPSRTDCPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGYALDMPADEREKRHQFNFKHVTTHTSQEWAATFVSELNDTIVEAQLRTRQIPPLLPNKVAVDCFSKSNNRLIILGFNATLTEPVDALGRGDQIKELELKVHPDLKEPLKKLSDDPKTTIVVLSGSGRAVLDKNFGEYNMWLAAENGMFLRLTSSEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFELRETSIIWNYKYADVEFGRLQARDLLQHLWTGPISNASLDVFQGGRSVEVRAVGVSKGAAIDRILGEIVHNKGMKEPIDYVLCIGHFLSKDEDVYKFFEPELPTESSPMAKAMLSNSYRPSSLPRFSSSKSGSKASHYKKQRSLSNLERRAIERTTSDPWRPPGRDRMSLYEGSSVLDLKGDNYFSCAVSRKRSSARYLLKTSHDIVNLLSDLADRSSSPPT* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1113 916 MobiDBLite consensus disorder prediction 835 855 - -
Tpr3g1113 916 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 77 546 - -
Tpr3g1113 916 Pfam Trehalose-phosphatase 601 803 IPR003337 GO:0003824|GO:0005992
Tpr3g1113 916 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 78 543 IPR012766 GO:0003825|GO:0005992
Tpr3g1113 916 MobiDBLite consensus disorder prediction 22 45 - -
Tpr3g1113 916 Gene3D Glycogen Phosphorylase B; 325 527 - -
Tpr3g1113 916 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 67 906 - -
Tpr3g1113 916 MobiDBLite consensus disorder prediction 817 834 - -
Tpr3g1113 916 CDD HAD_TPP 576 795 - -
Tpr3g1113 916 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 67 906 IPR001830 GO:0003824|GO:0005992
Tpr3g1113 916 SUPERFAMILY HAD-like 575 763 IPR036412 -
Tpr3g1113 916 Gene3D Glycogen Phosphorylase B; 70 324 - -
Tpr3g1113 916 Pfam Glycosyltransferase family 20 78 543 IPR001830 GO:0003824|GO:0005992
Tpr3g1113 916 CDD GT20_TPS 78 543 IPR001830 GO:0003824|GO:0005992
Tpr3g1113 916 MobiDBLite consensus disorder prediction 817 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1113 Tpr-Chr3 10144974 10150963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1113 1 914 Trehalose Biosynthesis Gene Families AT1G78580 73.452 0.0 1389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1113 K16055 - gmx:100816642 1544.64