Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1111 ATGCCTCGTAAAGTTAACTATGGATTTGATTACGACAATGATGACTATGATGACTATGATGATGACTATGATTATGATGTTGACACTGATAATAATAATAATAATAATAATTATGGAGCAGGAGAAGGGCCTGATACAAAGCAAGAGACCATCAAGACTGGAGTTTGGGGATGCTCCATTTGTACTTATGACAATGATGAGAGTATGACTTCGTGTGATATTTGTGGCGTTATGCGTTATCCCTTGGTTAACAATGGAACTTCCAACAGTAACAAAACAGACAAAGTTAAAAACTCTAAAGATTCTCAGCTTTCATCAAGCAGTAGAGAGAAGAAAGAACTTGCTGTAGAATCCAATGCTGAAAGTCTAGATAACCTATCATCCTTGATGCAAAAGAACAAGCAGGATAGTGCAGCCAAGAACAAGCTTTCCAAAAATGTAGAAATTAATCTTGAAACAATTGGTGAAACTTTAAACAGCTTATCATCATCTTTGCCAAAGGACAAAGGAGATAATGCAAATAGAATAAATTCTTCGAAAAATGGTACACATGGTACCCAGTCAAACAAAGAAAAGTCTGGTAGTTTGTCCGCACTGCCAAAAGTCGAAGAAAGTGATAAGCTTAGTTTGTCTTCTAACAAAGACGGAAAGTCTGAAAGTGCTTCCAGCAGTTTCAACCACATGGTTCTTGATGAAAGATCTGGAAATTCTGATAATACTAATGCTAAGGGACCTCATAAACAAGTTCCTTACCAGCCAGAAAAGTGGATGCTCCCTCAACAGTCTGAAGATACGTTGACTCAGTTGAATCTTGCAATTGTTGGTCATGTTGATTCTGGAAAATCAACACTATCCGGTAGGTTATTACACCTATTGGGACGAATTTCCAAGAAAGAAATGCACAAAAATGAAAAGGAGGCCAAGTTACAGGGCAAAGGATCCTTTGCTTATGCTTGGGCACTTGATGAAAGTTCTGAAGAAAGGGAAAGGGGAATAACCATGACAGTAGCTGTGGCATATTTTGACACTAAGAAATATCACGTTGTTGTGCTCGACTCTCCTGGTCATAAAGATTTTATCCCAAATATGATTTCTGGAGCTACACAAGCTGATGCTGCAATTCTTGTTATAGATGCCTCACTTGGTGCATTTGAAGCTGGTATGGATGGTGGCAAAGGACAAACAAGGGAACATGCACAACTTATAAGAAGTTTTGGTGTAGACCATGTTATAGTTGCAGTAAATAAGATGGATGCTGTAGCATTCTCCAAAGACCGTTTTGATTTTATAAGACATCAGCTGGGAATTTTTCTCCGTTCATGTGGGTTCAAAGATTCTTCTCTCTCATGGATTCCCTTGAGTGCCATGGAAAATCAAAATTTGGTGGCATCCCCTTCTGATGCTCGTTTCAAAAACTGGTATACTGGACCTTATCTGTTAGATGCAATTGATTCATTACAACCTCCTACTAGAGAATTCGCAAAACCTCTGTTAATGCCGATATGTGATATCATCAAATCAACTGCGCAAGGACAGGTGTCTGCTTGTGGTAAACTGGAAGCAGGAGCTCTTAGAAGTGGAACAAAGGTTTTAGTTATGCCTTCAGATGTTGTTGGAACAGTACGCACATTGGAGCGTGACTCTAATGTCTGCTCTGTTGCAAGAGCTGGAGATAACGTGTCCGTAACATTGCATGGTGTTGATGGAAGTCATGTATTTTCTGGAGGCGTATTGTGTCATCCTGATTTTCCTGTTGCAATTGCAAAGCATTTGGAGTTGAAATTGCTTGTCTTGGATGGTGCAAGTCCCATATTGGTCGGCGCCCAGTTAGAGTTTCATATACATCATGCAAAGGAACCTGCTAGAGTTTCAAAAATATTGTCAGTACTTGATCCCAAGACCGGTAAGGTGACCAAAAAGTCCCCTCGCTGTCTCACGTCAAAACAAAGTGCAGTAATTGAGGTGATTTTGCATGAGCCAGTCTGTGTGGTAGAGTTTTCTAGATGTAAAGCTCTTGGAAGAGTATCCCTTAGATCATTAGGAAGAACAATTGCAGTTGGACTTGTGACAAGAATAATCGAAGAACAAGGTTAA 2094 0.3959 MPRKVNYGFDYDNDDYDDYDDDYDYDVDTDNNNNNNNYGAGEGPDTKQETIKTGVWGCSICTYDNDESMTSCDICGVMRYPLVNNGTSNSNKTDKVKNSKDSQLSSSSREKKELAVESNAESLDNLSSLMQKNKQDSAAKNKLSKNVEINLETIGETLNSLSSSLPKDKGDNANRINSSKNGTHGTQSNKEKSGSLSALPKVEESDKLSLSSNKDGKSESASSSFNHMVLDERSGNSDNTNAKGPHKQVPYQPEKWMLPQQSEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKEMHKNEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFIPNMISGATQADAAILVIDASLGAFEAGMDGGKGQTREHAQLIRSFGVDHVIVAVNKMDAVAFSKDRFDFIRHQLGIFLRSCGFKDSSLSWIPLSAMENQNLVASPSDARFKNWYTGPYLLDAIDSLQPPTREFAKPLLMPICDIIKSTAQGQVSACGKLEAGALRSGTKVLVMPSDVVGTVRTLERDSNVCSVARAGDNVSVTLHGVDGSHVFSGGVLCHPDFPVAIAKHLELKLLVLDGASPILVGAQLEFHIHHAKEPARVSKILSVLDPKTGKVTKKSPRCLTSKQSAVIEVILHEPVCVVEFSRCKALGRVSLRSLGRTIAVGLVTRIIEEQG* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1111 697 ProSiteProfiles Zinc finger RanBP2 type profile. 52 81 IPR001876 -
Tpr3g1111 697 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 266 497 IPR000795 GO:0003924|GO:0005525
Tpr3g1111 697 ProSitePatterns Zinc finger RanBP2-type signature. 56 75 IPR001876 -
Tpr3g1111 697 SUPERFAMILY Ran binding protein zinc finger-like 54 79 IPR036443 -
Tpr3g1111 697 CDD EF1_alpha 270 489 - -
Tpr3g1111 697 Gene3D Translation factors 587 696 - -
Tpr3g1111 697 Pfam Elongation factor Tu C-terminal domain 592 692 IPR004160 -
Tpr3g1111 697 Gene3D - 257 490 IPR027417 -
Tpr3g1111 697 CDD HBS1_C_III 584 692 - -
Tpr3g1111 697 MobiDBLite consensus disorder prediction 162 227 - -
Tpr3g1111 697 MobiDBLite consensus disorder prediction 162 195 - -
Tpr3g1111 697 Gene3D Translation factors 493 585 - -
Tpr3g1111 697 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 589 693 IPR009001 -
Tpr3g1111 697 MobiDBLite consensus disorder prediction 86 119 - -
Tpr3g1111 697 PANTHER TRANSLATION FACTOR 87 695 - -
Tpr3g1111 697 SUPERFAMILY Translation proteins 488 583 IPR009000 -
Tpr3g1111 697 Pfam Elongation factor Tu GTP binding domain 269 485 IPR000795 GO:0003924|GO:0005525
Tpr3g1111 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 268 511 IPR027417 -
Tpr3g1111 697 PANTHER OS04G0595300 PROTEIN 87 695 - -
Tpr3g1111 697 PRINTS GTP-binding elongation factor signature 270 283 IPR000795 GO:0003924|GO:0005525
Tpr3g1111 697 PRINTS GTP-binding elongation factor signature 329 337 IPR000795 GO:0003924|GO:0005525
Tpr3g1111 697 PRINTS GTP-binding elongation factor signature 349 359 IPR000795 GO:0003924|GO:0005525
Tpr3g1111 697 PRINTS GTP-binding elongation factor signature 365 376 IPR000795 GO:0003924|GO:0005525
Tpr3g1111 697 PRINTS GTP-binding elongation factor signature 410 419 IPR000795 GO:0003924|GO:0005525
Tpr3g1111 697 MobiDBLite consensus disorder prediction 94 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1111 Tpr-Chr3 10126745 10134564 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1111 54 695 Eukaryotic Initiation Factors Gene Family AT5G10630 59.380 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1111 K14416 - gmx:100798594 1069.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2807 7 35355302 35358408 Tpr3g1111 3 10126745 10134564 PCT