Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1078 ATGGAAAACATTGCCGCGCAATTAAAGCGCGGCATCTCGCGCCAATTCTCCTCCGGTTCGTTACGTAAAACTCTCAGCCGTCAATTCACGCGTCAAGCTTCTCTCGATCCACGTCGTAACAATCTCCGATTCAGTTTCGGTCGTCAATCATCTCTCGATCCGATCCGTCGTAGTCCTGGTCAAGATGAAGCCGAACTCACCGTACCGGAGAATCTCGATTCCACCATGCAACTTCTCTTTATGGCTTGTCGTGGTGATGTTAAAGGTGTGGAAGATTTGCTTAACGAAGGTATCGATGTTAATAGCATTGATCTTGATGGTCGTACTGCTCTTCATATCGCCGCCTGTGAAGGTCATGTTGAAGTTGCTAAACTCTTACTCAGCCGTAAGGCTAATCTTGATGCTCGTGATCGTTGGGGCAGTACGGCTGCGGCTGATGCTAAATATTATGGAAATACAGAAGTTTATTATATGTTGAAGGCGCGTGGGGCAAAAGTGCCGAAAACCAGGAGGACTCCAATGACTGTTGCAAATCCTCGTGAAGTTCCTGAATATGAACTCAATCCGTTAGAGCTACAGGTTCGGAAGAGTGATGGTATTTCAACGGGGACATATCAAGTAGCTAAATGGAATGGCACAAAGGTTGCAGTGAAAATACTTGATAAGGACAGTTATTCAAATCCTGATACCATAAATGTTTTCAAGCACGAGCTCACATTATTGGAAAAGGTGCGACATCCTAATGTGGTCCAGTTTGTTGGAGCTGTCACCCAAAACATACCTATGATGATTGTTCGAGAGTACCATGCTAAGGGTGACTTAACAGGTTATATTCAAAAGAAAGGGCGCTTGTCCCCATCAAAAGTTCTACGGTTTGCTCTTGACATTGCTAGGGGCATGAATTATCTTCACGAATGCAAACCAGATCCTATTATCCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAATGGAGGGCAATTGAAGGTAGCTGGATTTGGCACGGTGCGATTTTCACTACTCTCACCTGATAAAGCATTGTTAGACCAGCCCGAGACCAACTTGGACCCTTTAAGCTTGTACGTGGCACCAGAGATTTACAGAGGTGATCTATTTGATAGAAGTGTGGATGCGTATTCTTTTGGTCTCATTGTATATGAGATGATAGAGGGTATACCGCCCTTCCATCCCAAGCCTGCAGAGGAAGCTTTGAAACTGCTGTGTTCAGAAGGGAAGAGACCTCCATTCAAGATCAAAACAAAAAGTTATCCTCCGGATTTGAAAGAGTTGATTGAGGAATGTTGGGATCCAGACCCTGTTGTCAGACCAACATTTTCTCAAGTCATTATCCGGTTGGACAAAATTGTTGCAAATTGCTCAAAACAAGGATGGTGGAAAGATACTTTTAAACTTCCATGGAAATAA 1428 0.4363 MENIAAQLKRGISRQFSSGSLRKTLSRQFTRQASLDPRRNNLRFSFGRQSSLDPIRRSPGQDEAELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVAKLLLSRKANLDARDRWGSTAAADAKYYGNTEVYYMLKARGAKVPKTRRTPMTVANPREVPEYELNPLELQVRKSDGISTGTYQVAKWNGTKVAVKILDKDSYSNPDTINVFKHELTLLEKVRHPNVVQFVGAVTQNIPMMIVREYHAKGDLTGYIQKKGRLSPSKVLRFALDIARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKVAGFGTVRFSLLSPDKALLDQPETNLDPLSLYVAPEIYRGDLFDRSVDAYSFGLIVYEMIEGIPPFHPKPAEEALKLLCSEGKRPPFKIKTKSYPPDLKELIEECWDPDPVVRPTFSQVIIRLDKIVANCSKQGWWKDTFKLPWK* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1078 475 CDD STKc_MAP3K-like 200 453 - -
Tpr3g1078 475 Gene3D - 47 185 IPR036770 -
Tpr3g1078 475 Gene3D Phosphorylase Kinase; domain 1 186 269 - -
Tpr3g1078 475 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 33 473 - -
Tpr3g1078 475 ProSiteProfiles Ankyrin repeat region circular profile. 106 138 - -
Tpr3g1078 475 Pfam Protein tyrosine and serine/threonine kinase 202 451 IPR001245 GO:0004672|GO:0006468
Tpr3g1078 475 ProSiteProfiles Protein kinase domain profile. 190 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1078 475 PIRSF ILK 8 474 - -
Tpr3g1078 475 SMART ANK_2a 106 135 IPR002110 GO:0005515
Tpr3g1078 475 SMART ANK_2a 74 102 IPR002110 GO:0005515
Tpr3g1078 475 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 473 - -
Tpr3g1078 475 SUPERFAMILY Ankyrin repeat 75 176 IPR036770 -
Tpr3g1078 475 SUPERFAMILY Protein kinase-like (PK-like) 205 453 IPR011009 -
Tpr3g1078 475 SMART serkin_6 194 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1078 475 Gene3D Transferase(Phosphotransferase) domain 1 271 471 - -
Tpr3g1078 475 Pfam Ankyrin repeats (3 copies) 80 166 IPR002110 GO:0005515
Tpr3g1078 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Tpr3g1078 475 ProSiteProfiles Ankyrin repeat profile. 106 138 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1078 Tpr-Chr3 9817499 9824872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1078 1 474 MAP Kinase Kinase Kinase AT2G43850 76.569 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Tpr3g1078 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1078 - - aprc:113857978 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1078 3 9817499 9824872 Tpr3g1078 3 9817499 9824872 ECH