Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1072 ATGGCAAATTCAAAGAGCTCATCGGGTATTCGAAATTTGGTGTATACTGGTCCTGGAAAGCATGCTCATGCTCTGCTTCCTCCGAAAAGTCCATTTCCTACTATTTCTCAAACATATACTGATTATGTTTCAAATCCTACAATTGGTTCAAAGCCTGTTAATAAGCCAAGAGAAGGAAACTCTCACCACCAACGTACTTCATCTGAGAGCCATCTTATTGAGGAGCAGCCATCATGGCTTGATGATCTCCTAAATGAGCCAGATACACCTGTCCGAAGGGGTGGTCATAGGCGTTCATCAAGTGATTCTTTTGCATATATCGACAATATTAATGCATCTAACATTGGTTACGCGGATCATGATGAGTATAAATATAAGAATTTCTTATCTATTCCGGCTTGGTCACCCCCAGAATTTGATCGCAACAAAGATGCTCGTCATGCATCCATGTATGCAGAAATGAATCTAGCAAAACAGAAAAACAGATCATGGGAGTCTTTTTCAAATGCGAGTGGTGTTCCATCTGGCAGAGACAGTGTTGCTTTTCAGAGATCAGGATCACCAACCCCAAGTACACTATACGAAGCAGATCGGATTCTACCGACTGCAAATGAAAATCATGATTCAGTAGAATCTGGCTTACAAGACATAAAATCATCTTTTGAAAGAAAGGATGGTTTACATGCAAAGTCATCTGCTTCTGAAACAGATTCAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGGGTTCGTAAACTTCAGTACATAGCCGAGCTGGAAAGAAATGTACAGGCTTTACAGGCAGAAGGAACTGAAGTATCGGCTGAGCTTGAGTTTCTTAACCAGCAGAATCTTATCTTGAGTATGGAGAATAAAGCACTCAAACAACGTTTAGAAAGTTTAGCACAAGAGCAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAGAGAGAGATCGGAAGATTACGTAGCATGTATCAACAAAATCTGCAGCAGTCACATCAGCCTCAACAACAACCATCTGGTAGTCATAGACGCTCGAACAGCAGAGACCTTGACTCTCAGTTTGCTAACCTTTCTCTGAAGCACAAGGACACCAATTCTGGGCACGACCCTGCAAATGGAGCACTAAGAATTTAG 1143 0.4147 MANSKSSSGIRNLVYTGPGKHAHALLPPKSPFPTISQTYTDYVSNPTIGSKPVNKPREGNSHHQRTSSESHLIEEQPSWLDDLLNEPDTPVRRGGHRRSSSDSFAYIDNINASNIGYADHDEYKYKNFLSIPAWSPPEFDRNKDARHASMYAEMNLAKQKNRSWESFSNASGVPSGRDSVAFQRSGSPTPSTLYEADRILPTANENHDSVESGLQDIKSSFERKDGLHAKSSASETDSKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGTEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRSMYQQNLQQSHQPQQQPSGSHRRSNSRDLDSQFANLSLKHKDTNSGHDPANGALRI* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1072 380 SUPERFAMILY Leucine zipper domain 246 288 IPR046347 GO:0003700|GO:0006355
Tpr3g1072 380 MobiDBLite consensus disorder prediction 224 244 - -
Tpr3g1072 380 SMART brlzneu 235 294 IPR004827 GO:0003700|GO:0006355
Tpr3g1072 380 MobiDBLite consensus disorder prediction 56 70 - -
Tpr3g1072 380 MobiDBLite consensus disorder prediction 43 81 - -
Tpr3g1072 380 MobiDBLite consensus disorder prediction 329 346 - -
Tpr3g1072 380 CDD bZIP_plant_RF2 239 285 IPR044759 GO:0003700|GO:0006355
Tpr3g1072 380 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 1 368 IPR044797 -
Tpr3g1072 380 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 1 368 - -
Tpr3g1072 380 Coils Coil 250 305 - -
Tpr3g1072 380 MobiDBLite consensus disorder prediction 329 380 - -
Tpr3g1072 380 MobiDBLite consensus disorder prediction 224 245 - -
Tpr3g1072 380 Gene3D - 238 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1072 Tpr-Chr3 9768417 9772912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1072 24 309 bZIP Transcription Factor Family AT2G42380 30.421 6.96e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1072 - - cam:101495568 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1072 3 9768417 9772912 Tpr3g1072 3 9768417 9772912 ECH