Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1071 ATGGGGAAAAAGAGCAAGAGCTTTTTCTCATTTCGCCGTCGCTCCAAAAAACTACAACCACCACAGCCTCCGCCGTCTACGCTCGAAATCACCGGTTCACCGTCAGAAAATCCATTAGTCAAACCGAAGAAAAAAACAGGCGGAGCCAAATTATGGATGCGGTTCGACCGCTCCGGAAAGTCAGAGCTCGTTGAGTGGGAGAAAAACACGATCATCCGCCACGCCGCTATTCCTGCCAGAGACCTAAGAATTCTCGGTCCTGTCTTCTCTCATTCATCCAATATCCTCGCGAGAGAGAAAGCAATGGTGGTGAATTTGGAGTTTATAAAGGCAATAGTAACAGCTGAAGAAGTTTTATTGCTTGATCCATTACGACAAGAAGTTCTTCCATTTGTTGAACAATTGAGGCAACAGCTTCCACAGAAGACTCAACCTAAGCTTCTTGGTGGTGGTGGTGGTGGTGATGATAATGTGCCTGAAGCTGCTGAAGGTTTACAATCCGAACCGCTTCCATTCGAGTTTCAAGTGTTGGAAATTGCTTTGGAAGTTGTTTGTACTTATTTGGATTCAGATGTTGCTGACCTTGAGAGAGGTGCTTATCCTGTGTTGGATGAATTGGCTAGGAATGTTAGTACTAAGAATCTTGAACATGTTAGAAGCTTGAAGAGTAATCTTACTCGGTTGCTCGCACGTGTGCAGAAGGTACGAGATGAAATTGAACATCTATTAGATGACAATGAAGACATGGCTCAACTATATTTGACAAGAAAGTGGTTGCAAAACCAACAAGCTGAGGCTCATTTGGCAGCCACAACCCCGAACCTTTCAATTGTTCGACGGCTTAATTCTACCAGAAGTGGAAGTCTTGTGACTAGCAATGATGATAATGATGTGGAGGACTTGGAGATGTTGCTTGAAGCATACTTTATGCAACTGGATGGAACTCGTAACAAGATATTGTCTGTTAGGGAGTATATCGATGACACCGAAGATTATGTCAACATCCAACTTGATAACCATAGGAATGAACTTATCCAACTGCAGTTGACATTGACCATTGCATCATTTGCTATTGCTGTTGAGACTTTGATAGCCGGTGCATTTGGTATGAACATTCCATGTACATTATACAAAATAAACGGAATATTTTGGCCTGCTGTTGGGATTATGACTGCAGTTTCCATAGTGATTTTCGTGCTTGTTTTAGCGTATGCTAAATGGAAAAAGTTGTTAGGTTCGTAA 1242 0.4243 MGKKSKSFFSFRRRSKKLQPPQPPPSTLEITGSPSENPLVKPKKKTGGAKLWMRFDRSGKSELVEWEKNTIIRHAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPQKTQPKLLGGGGGGDDNVPEAAEGLQSEPLPFEFQVLEIALEVVCTYLDSDVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQAEAHLAATTPNLSIVRRLNSTRSGSLVTSNDDNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAVETLIAGAFGMNIPCTLYKINGIFWPAVGIMTAVSIVIFVLVLAYAKWKKLLGS* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1071 413 CDD Mrs2_Mfm1p-like 52 410 IPR039204 -
Tpr3g1071 413 Coils Coil 218 252 - -
Tpr3g1071 413 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 349 400 IPR045863 -
Tpr3g1071 413 Gene3D - 40 123 - -
Tpr3g1071 413 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 10 413 IPR039204 -
Tpr3g1071 413 Pfam CorA-like Mg2+ transporter protein 221 401 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Tpr3g1071 413 Gene3D Magnesium transport protein CorA, transmembrane region 125 344 - -
Tpr3g1071 413 MobiDBLite consensus disorder prediction 1 45 - -
Tpr3g1071 413 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 10 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1071 Tpr-Chr3 9762870 9766547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1071 41 413 MRS2 Gene Family AT3G58970 72.917 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1071 K16075 - gmx:100812561 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1071 3 9762870 9766547 Tpr2g4729 2 52669750 52674582 PCT