Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1065 ATGGAGAAGTATGAGGAAGTAAAAGATATTGGGGATGGAAATTATTCAGTTGTGAAGCTTATTCGCCACATAGACACAAAATCCCTGTTTGCTGTCAAGTACATCCCAAGAGGCCACACGGTTTTTTTGAGTCCAACACATATTGCAATAGTTATGGAGTATGCAGCTAGTGGTGATCTATTTGATTATGTTTGCAGTCAGGGCACATTAAGTGAAGATAAGGCTAGGTATGTCTTCCAACAGCTAATTTCAGGGGTTAGTTATTGTCATGACATGGAAATTTGTCACCGAGATTTAAAGTTGGAAAACACATTATTGGACGGAAAGCGTATTAGGATTTGTGATTTTGGCTTTTCTAAGTCATATCTACTTCATTCGACGCCAAATTCAAGGATCGGAACTCCGTCCTATATTGCACCAGAGATTTTTTCTGGTAAAGAATACAATGGAAAGTTAGCAGATATATGGTCATGTGGAGTGATGTTGTATATAATGCTAGTGGGAGAATTGCCATTTGGGGACCAAAAGGATTTGCAAAATCTCAAGAAAACAATGAATAAAATTATGCTTGTTCAATACAAGATCCCGGACACCGTTCACATTTCTCAACATTGTAGAAATCTAATATCTCGTATTTTTGTGGCAAATCCAATGAAAAGAATCAGCATGAGAGAAATTAAGTCCCACCCATGGTTTTTAGAGAACTTGCCTAAGGAATCAATAAAAGAGGCTCAAGATGTGAACTACACAAAAGAAAATCCAATATATTTTCTTCAAAGTATAGAAGAGATAATGAACATTATTGAGGAAGCTAAAATTCTAGCTACAACTTCTAGTTCAGATCAATTGGAGGATTTAACTGAGGCATTAAAGAAGATGTAA 882 0.3617 MEKYEEVKDIGDGNYSVVKLIRHIDTKSLFAVKYIPRGHTVFLSPTHIAIVMEYAASGDLFDYVCSQGTLSEDKARYVFQQLISGVSYCHDMEICHRDLKLENTLLDGKRIRICDFGFSKSYLLHSTPNSRIGTPSYIAPEIFSGKEYNGKLADIWSCGVMLYIMLVGELPFGDQKDLQNLKKTMNKIMLVQYKIPDTVHISQHCRNLISRIFVANPMKRISMREIKSHPWFLENLPKESIKEAQDVNYTKENPIYFLQSIEEIMNIIEEAKILATTSSSDQLEDLTEALKKM* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1065 293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 94 106 IPR008271 GO:0004672|GO:0006468
Tpr3g1065 293 PANTHER SERINE/THREONINE KINASE 41 280 - -
Tpr3g1065 293 PANTHER SERINE/THREONINE KINASE 2 40 - -
Tpr3g1065 293 ProSiteProfiles Protein kinase domain profile. 1 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1065 293 Pfam Protein kinase domain 41 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1065 293 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Tpr3g1065 293 Gene3D Transferase(Phosphotransferase) domain 1 1 292 - -
Tpr3g1065 293 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 41 280 - -
Tpr3g1065 293 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 40 - -
Tpr3g1065 293 SUPERFAMILY Protein kinase-like (PK-like) 2 255 IPR011009 -
Tpr3g1065 293 SMART serkin_6 4 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1065 Tpr-Chr3 9712798 9715646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1065 3 248 CBL-interacting serine-threonine protein kinases AT4G24400 36.299 1.05e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Tpr3g1065 Pkinase 7e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1065 K14498 - gmx:100812259 386.341