Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1063 ATGAATCCAATTTTGATTCTTCTCATGTTGTTCTTTCTCATCACAGTCACAGAAACATCAAACTCAACAACAAAAACAACATCAAACTCAACAACATGTCCTGTGTCTTTGAATTATGTCCAAACAGTCCCTTGGAATTCTTCACTATGTCATAACTTCAAACCTTTACAATCCAAAACAGAAACACAACAAACTCTTTGTTGTCAAGCTCTTTTATCTCTCTTTGGTATAGCACTTGCTGAATATCTTAACAAAAACTCACTTTTCCATTTCCATAACATACCTATCTCAGAAGCTTGTTTACATAATTACCAAACTAGCCTCACTTCACTTTCACTTCCTAACAATCTTGTTTCTTCATGTTTTGATCCATCTCAGTTTGTTTCAACTCCTAATACATGTGCTCAAATTCAAACTAAACAAGATTGGCTTAACAAAGTTGATTCTAAAGATTTAAATGTTCTTGATACTGTTTGTGAACCAGATTTAACAGATCCTCATCGTTGTCAGGTTTGTCAAAATCAAGGTTTTAAGGTTCAACAGATGCTGACTCAGATTGATGGTAATAGTTCACATTCTCAAGATTGTTTTTACTTTACAATACTTTATATTGCTGGAATTGTGAATAAACTTGGTCCTGAGAGTGAAGGTGTTTTGGCTTGTATTCTTATTTTGTTAGTTAATACAAAAGGGAATGATTCTAAGAAGAAACATCATCATGCTCTTGTTATTGGATTGGTTGTAGCTTCAATTGTGTTTGTGTGTTTTTTGATAGGGTTGTTGTATTTTTGGTATATTTGGTGGGTGAAGAAAGGAAAGAATGAAAATTTATTATCTGATAATAGTGGCGGTTCACATGTACCAAGTTTTAGTTTAAGGGTTAGACCGAAAAGTGGGTTGATTTGGTTTGAGTTTAAGGATCTTGTGAAGGTTACTGACAATTTTTCGGCCGAGAATTTCATTGGAAGAGGCGGGTTTGGTTCGGTTTACAAGGGGGTTTTACCGGATGGGACGATTGTTGCGGTTAAAAAGATTGAAGAGTCGGATTATCAAGGTGATGTTGAGTTTTATAGAGAGGTGGGGATTGTTAGTAGTTTGAAGCATCGTAATTTGGTGCCGCTAAGAGGGTGTTGTGTGGTTGGTGAGGATGTTAATCCTGAGTTCATTGGAAAGTATCTGGTTTATGAGTATATGCCGAATGGTAATCTTAAAGATCATCTTTTTCCGGACACGGAGAACCAAAATGTGAAGCAACCTTTGACTTGGTCTCAAAGAAAAAACATAATCTTGGATGTGGCGAACGCGCTGGTTTATTTGCATTATGGAGTTAAACCACCTGTCTATCACAGAGATATCAAAGCTACCAATATACTACTTGATGCAGGTATGAGAGCAAGGGTTGCAGATTTCGGGCTGGCGAAGCAGGACTACAGTCAAAATATGTCTCAGCTAAATACGAGAGTAGCTGGAACTCGCGGATACCTAGCTCCGGAATACGCACTTTATGGTCAGTTAACTGAGAAGAGTGATGTCTATAGCTTTGGTGTGGTTGTTCTTGAGATTATGTGTGGAAAAAAGGCTCTTCAGTTGTCTTCGTCCGGAGAGCCTAATTTCTTGATCACAGATTGGGTTTGGTCATTAATGAAATCTGGAAAAATGGATAAGGCTTTGGATGTCTCTATCTCAATGGATGGAAATTCCACAAAAAGCATAATGGAGAGATTTTTAGTGGTTGGAATTTTGTGCTGTCATGTAGTGGTTGCTTTACGGCCCACAATTTTGGATGCTTTGAAGATGTTAGAAGGAGACATTGAGGTTCCATCAATTCCAGATAGGCCAATGAATCTACGGAATCGCATGTTTGCCAATGGTGATTCAGCTTAA 1884 0.3753 MNPILILLMLFFLITVTETSNSTTKTTSNSTTCPVSLNYVQTVPWNSSLCHNFKPLQSKTETQQTLCCQALLSLFGIALAEYLNKNSLFHFHNIPISEACLHNYQTSLTSLSLPNNLVSSCFDPSQFVSTPNTCAQIQTKQDWLNKVDSKDLNVLDTVCEPDLTDPHRCQVCQNQGFKVQQMLTQIDGNSSHSQDCFYFTILYIAGIVNKLGPESEGVLACILILLVNTKGNDSKKKHHHALVIGLVVASIVFVCFLIGLLYFWYIWWVKKGKNENLLSDNSGGSHVPSFSLRVRPKSGLIWFEFKDLVKVTDNFSAENFIGRGGFGSVYKGVLPDGTIVAVKKIEESDYQGDVEFYREVGIVSSLKHRNLVPLRGCCVVGEDVNPEFIGKYLVYEYMPNGNLKDHLFPDTENQNVKQPLTWSQRKNIILDVANALVYLHYGVKPPVYHRDIKATNILLDAGMRARVADFGLAKQDYSQNMSQLNTRVAGTRGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGKKALQLSSSGEPNFLITDWVWSLMKSGKMDKALDVSISMDGNSTKSIMERFLVVGILCCHVVVALRPTILDALKMLEGDIEVPSIPDRPMNLRNRMFANGDSA* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1063 627 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 612 - -
Tpr3g1063 627 SMART serkin_6 315 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1063 627 Gene3D Phosphorylase Kinase; domain 1 288 397 - -
Tpr3g1063 627 Gene3D Transferase(Phosphotransferase) domain 1 398 607 - -
Tpr3g1063 627 ProSitePatterns Protein kinases ATP-binding region signature. 321 344 IPR017441 GO:0005524
Tpr3g1063 627 Pfam Protein kinase domain 317 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1063 627 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 23 612 - -
Tpr3g1063 627 CDD STKc_IRAK 321 602 - -
Tpr3g1063 627 ProSiteProfiles Protein kinase domain profile. 315 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1063 627 Pfam SPARK 28 197 IPR043891 -
Tpr3g1063 627 SUPERFAMILY Protein kinase-like (PK-like) 291 601 IPR011009 -
Tpr3g1063 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1063 Tpr-Chr3 9705098 9712628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1063 28 624 Receptor kinase-like Gene Family AT1G11050 55.868 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Tpr3g1063 Pkinase 4.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1063 - - mtr:MTR_8g088760 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1063 3 9705098 9712628 Tpr3g1063 3 9705098 9712628 ECH