Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1050 ATGGCTTTGGGAAGAGGCAGTGCATTGGTTCTACTAGTCTGTTTTTTTGTGCTTCACTCTGAGTTGGCTCATGCTGCCACCTACACTGTTGGAGGTGCTGGTGGTTGGACCTTTAACACTGTTGGGTGGCCTCAAGGAAAACGCTTTAGGGCTGGTGACACACTTGTGTTCAACTATAGCCCAAGGGCTCACAATGTGGTGGCGGTGAACAAATTAGGGTATAATAGCTGCAAGACTCCAGCAGGAGCAAAAGTGTATCAGTCAGGAAAGGATCAAATCAGACTTGCTAGAGGACAAAACTATTTCATTTGCAATTTTGTCGGTCATTGCGAGTCTGGAATGAAAATTGCCATCAATGCTGCTTGA 366 0.459 MALGRGSALVLLVCFFVLHSELAHAATYTVGGAGGWTFNTVGWPQGKRFRAGDTLVFNYSPRAHNVVAVNKLGYNSCKTPAGAKVYQSGKDQIRLARGQNYFICNFVGHCESGMKIAINAA* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1050 121 CDD Plantacyanin 26 120 IPR041844 -
Tpr3g1050 121 ProSiteProfiles Phytocyanin domain profile. 26 121 IPR003245 GO:0009055
Tpr3g1050 121 Pfam Plastocyanin-like domain 36 114 IPR003245 GO:0009055
Tpr3g1050 121 PANTHER BLUE COPPER PROTEIN 4 119 IPR039391 GO:0009055
Tpr3g1050 121 PANTHER BASIC BLUE-LIKE PROTEIN 4 119 - -
Tpr3g1050 121 SUPERFAMILY Cupredoxins 26 120 IPR008972 -
Tpr3g1050 121 Gene3D - 26 120 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1050 Tpr-Chr3 9521401 9523213 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1050 8 120 Phytocyanin Superfamily AT1G17800 39.496 5.46e-22 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1050 - - gmx:100305948 215.698