Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1049 ATGGCTTTGGGAAGAGGCAGTGCATTGGTTCTACTAGTCTGTTTTTTTGTGCTTCACTCTGAGTTGGCTCATGCTGCCACCTACACTGTTGGAGGTGCTGGTGGTTGGACCTTTAACACTGTTGGGTGGCCTCAAGGAAAACGCTTTAGGGCTGGTGACACACTTGTGTTCAAGTATAGCCCAAGGGTGCACAATCTTGTGGCAGTGAACAAAGCAGGGTATGATAAGTGCATTACTCCAAGAGGATCAAAGGTGTATCGGTCAGGAAAGGATCAGATCAAGCTTGTTAGGGGACAAAACTATTTCATATGCAATTTTGCGGGTCATTGCCAGTCTGGAATGAAAATAGCCATCAATGCTGCTTGA 366 0.4617 MALGRGSALVLLVCFFVLHSELAHAATYTVGGAGGWTFNTVGWPQGKRFRAGDTLVFKYSPRVHNLVAVNKAGYDKCITPRGSKVYRSGKDQIKLVRGQNYFICNFAGHCQSGMKIAINAA* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1049 121 PANTHER BLUE COPPER PROTEIN 4 119 IPR039391 GO:0009055
Tpr3g1049 121 CDD Plantacyanin 26 120 IPR041844 -
Tpr3g1049 121 Pfam Plastocyanin-like domain 36 114 IPR003245 GO:0009055
Tpr3g1049 121 SUPERFAMILY Cupredoxins 26 120 IPR008972 -
Tpr3g1049 121 PANTHER BASIC BLUE-LIKE PROTEIN 4 119 - -
Tpr3g1049 121 ProSiteProfiles Phytocyanin domain profile. 26 121 IPR003245 GO:0009055
Tpr3g1049 121 Gene3D - 26 120 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1049 Tpr-Chr3 9514819 9516734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1049 8 120 Phytocyanin Superfamily AT1G17800 40.336 1.56e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1049 - - gmx:100305948 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1049 3 9514819 9516734 Tpr3g1049 3 9514819 9516734 ECH