Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1046 ATGGCTTTGTTTTCTCATTCACTTTTTCATTTTGCCTTATTAATAATCCTTATCTCCTTTGATTACAACAACCTTTTGGTTGGGGTATCATCAACCACTCTAAGCATTACCACAGACACAGAAGCATTGATCTCATTAAAGTCTCAATTAAGTAATAATGACACTTCTAATTCTCATTCATTATCCTCTTGGAGCCAGAACTCATCTCCTTGCAATTGGACTGGTGTCCTATGTGACAAGCATAACCAAAGAGTGATTGGTTTAGATCTTTCAGGCTTTGGACTCTCAGGTAACTTAAGTCCTTATATAGGTAACTTGTCCTCTCTTCAGTCCCTCCAATTGCAGGATAACCAGCTCATAGGAATCATTCCTAACCAAGTTACCAATCTATATAATTTGAGAGTTCTAAATATGAATTCTAACAGATTTGAAGGAATCACCATCCCTTCAAATCTTACCAATTTAAATGAGCTTCAAATTCTTGATTTGTCCTCAAACAAGATTGTAAGTAGAATTCCTGAAGACATCGGCAGCTTGAAAAAGCTGCAGGTGTTGAAACTTGGAAGGAATAGCTTCTATGGTACAATTCCACAATCTCTAGGAAATATTTCTTCTCTAAAGAATATAAGTTTCGGCACCAACTCTCTTACTGGCTGGATTCCTAGTGAATTAGGTAAGTTACATAATTTAATTGAGCTTGATCTCACTCTTAACAATCTTACTGGAACTGTTCCACCAGTAATATACAACTTGTCTTCCCTTGTGAACTTGGCCTTAGCTTCAAATTCTTTTTGGGGTGAGATACCTTATGATGTTGGTCATAAACTTCCAAAACTACTAGTTTTCAATATCTGCTTAAATAAGTTTACAGGTAGAATTCCAGGGTCTTTGCACAACCTCACAAACATTAGGGTCATTCGTATGGCCTCTAACCATTTGGAAGGAACAGTTCCACCTGGTTTAGGAAATCTTCCATCTCTTCACTTGTATAATATTGGCTATAACAGGATAGTCACCTCAGGAGTCAATGGTTTGGACTTCATTACTTCATTGACAAACAGCACTCACTTGAACTTTCTAGCAATTAATGGAAATATGCTTGAAGGTGTGATTCCTGAAACCATTGGCAATCTCTCAAAAGAACTCTCAAACTTATACATGGGAGGGAATCGTTTCAATGGAAGTATACCATCTTCCATTGGTCGTCTTAGCGGCTTGAAGTTGTTAAACTTGAGCCACAATTCAATCAGTGGTGAGATTCCAAAGGAGTTAGGCCAGTTAAAGGAACTGCAAGAGCTATATCTAGATGGAAATAAGATATCAGGAGCTATTCCAAATTCTCTTGGTAATCTTATAAAGTTAAACAAGATTGATTTGTCAGAAAATGAACTTGTGAGTAGAATACCAATCGGTTTTGGTAATTTTCAAAACCTGCTCTACATGGACTTATCTAGCAACAAACTCAATAGTAGCATACCTGTTGAAATCCTCAATCTACCAACTTTGAGCAATGTTTTAAACTTATCAAAGAATTTGTTGAGTGGACCAATACCTGAAGTTGTGAAATTGCCTACCATTGCAACTATTGACTTTTCCAACAACCAATTGTATGGAAACATTCCAAGCTCATTCAGCAGTTGTTTGAGCTTGGAGAAATTGTTTTTGTCCAACAATATGCTTTCAGGTTCCATTCCAAAAGCTCTTGGAGATGTCAGAGGCTTGGAAACTTTGGACTTGTCCTCCAACCTACTCTCAGGATTCATTCCTATTGAACTTCAAAATTTGCATGTCCTAACACTTTTAAACCTCTCTTATAATGATTTAGAAGGAGCCCTTCCTAGTGGTGGAGTTTTCCAAAATCTCTCTGATGTTCACTTAGAAGGCAATAAAAAACTATGCTTGCATTTTGCATGCGTGCATCAAGTCCATCAAAGAACACATGTCAGACTTTATATCATCATAGCTGTTGTGTTAACATTGGTACTATGTCTCACAATTGGCTTGCTACTATACATGAAGTATACAAAGGTTAAGGTAACAGCAACAACAGAGTCTGGACAGCTAAAGCCACAGGCTCTAATGATCTCTTATGACGAGCTTCGCTTGGCAACTGAGGAATTCAGTCAAGAAAAATTAATAGGAATTGGGAGTTTTGGATCAGTGTATAAAGGCTATCTAAATCAGGGAAATACTATTGCAGTGAAAGTGCTTGACACTCTAAGAACAGGTTCTTTAAAGAGTTTCTTTGCAGAGTGTGAGGCTATGAAGAATTCAAGGCATAGAAATCTGGTTAAGCTCATCACATCATGTTCTAGTGTTGACTTTAAAAACAATGATTTTCTGGCTTTGGTGTATGAGTATTTAAGTAATGGGAGCTTGGAAGATTGGATTAAGGGGAGGAGAAATCATGCAAATGGAAATGGTTTGAACCTTATGGAGAGAGTGAATATAGCTATAGATGTTGCTTGTGCATTAGATTACCTGCACAATGATAGCGAAACTCCCATTGTGCATTGCGATTTAAAACCAAGCAACATTCTCCTGGATGAAGATATGACTGCAAAGGTTGGAGACTTTGGTTTGGCTAGGTTTCTGATTCAAAGTTCAACTGATCCAGTTTCCATCAGCTCCACTCATGTCCTTAGGGGCTCAATTGGTTACATACCTCCAGAGTATGGATGGGGAGAGAAACCTTCAGCAGCAGGAGATGTATATAGTTTTGGGATAGTGTTAATAGAGCTCTTCTCTGGAAAAAGTCCACAGGATGATTGCTTTACAGGAGGCCTGAGCATAACAAAATGGGTGCAATCAGCCTTCAAAAACAAGACTGTTCAAGTCATTGACCCTCAGCTGCTATCTCTCATTTTTCATGATGATCCTGCTAGAGAAGACTCCAATCTACTAATCCATTGTGTGGAGGCAATTATGGGAGTTGGCATGTCCTGCACTGCAGACAATCCAGACGACCGCATTGGCATTAGAGTTGCTGTTCGCCAACTAAAAGCTGCCAGGGACTCTCTTATGAAAAAAATCTGA 3036 0.3834 MALFSHSLFHFALLIILISFDYNNLLVGVSSTTLSITTDTEALISLKSQLSNNDTSNSHSLSSWSQNSSPCNWTGVLCDKHNQRVIGLDLSGFGLSGNLSPYIGNLSSLQSLQLQDNQLIGIIPNQVTNLYNLRVLNMNSNRFEGITIPSNLTNLNELQILDLSSNKIVSRIPEDIGSLKKLQVLKLGRNSFYGTIPQSLGNISSLKNISFGTNSLTGWIPSELGKLHNLIELDLTLNNLTGTVPPVIYNLSSLVNLALASNSFWGEIPYDVGHKLPKLLVFNICLNKFTGRIPGSLHNLTNIRVIRMASNHLEGTVPPGLGNLPSLHLYNIGYNRIVTSGVNGLDFITSLTNSTHLNFLAINGNMLEGVIPETIGNLSKELSNLYMGGNRFNGSIPSSIGRLSGLKLLNLSHNSISGEIPKELGQLKELQELYLDGNKISGAIPNSLGNLIKLNKIDLSENELVSRIPIGFGNFQNLLYMDLSSNKLNSSIPVEILNLPTLSNVLNLSKNLLSGPIPEVVKLPTIATIDFSNNQLYGNIPSSFSSCLSLEKLFLSNNMLSGSIPKALGDVRGLETLDLSSNLLSGFIPIELQNLHVLTLLNLSYNDLEGALPSGGVFQNLSDVHLEGNKKLCLHFACVHQVHQRTHVRLYIIIAVVLTLVLCLTIGLLLYMKYTKVKVTATTESGQLKPQALMISYDELRLATEEFSQEKLIGIGSFGSVYKGYLNQGNTIAVKVLDTLRTGSLKSFFAECEAMKNSRHRNLVKLITSCSSVDFKNNDFLALVYEYLSNGSLEDWIKGRRNHANGNGLNLMERVNIAIDVACALDYLHNDSETPIVHCDLKPSNILLDEDMTAKVGDFGLARFLIQSSTDPVSISSTHVLRGSIGYIPPEYGWGEKPSAAGDVYSFGIVLIELFSGKSPQDDCFTGGLSITKWVQSAFKNKTVQVIDPQLLSLIFHDDPAREDSNLLIHCVEAIMGVGMSCTADNPDDRIGIRVAVRQLKAARDSLMKKI* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1046 1011 CDD STKc_IRAK 713 990 - -
Tpr3g1046 1011 Gene3D Ribonuclease Inhibitor 242 344 IPR032675 -
Tpr3g1046 1011 Pfam Protein kinase domain 708 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1046 1011 Gene3D Phosphorylase Kinase; domain 1 671 787 - -
Tpr3g1046 1011 SMART serkin_6 707 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1046 1011 ProSiteProfiles Protein kinase domain profile. 707 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1046 1011 ProSitePatterns Protein kinases ATP-binding region signature. 713 735 IPR017441 GO:0005524
Tpr3g1046 1011 SUPERFAMILY L domain-like 39 337 - -
Tpr3g1046 1011 Gene3D Transferase(Phosphotransferase) domain 1 788 1010 - -
Tpr3g1046 1011 SUPERFAMILY Protein kinase-like (PK-like) 689 1000 IPR011009 -
Tpr3g1046 1011 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 25 1007 - -
Tpr3g1046 1011 Gene3D Ribonuclease Inhibitor 345 639 IPR032675 -
Tpr3g1046 1011 Pfam Leucine rich repeat 381 440 IPR001611 GO:0005515
Tpr3g1046 1011 Pfam Leucine rich repeat 549 608 IPR001611 GO:0005515
Tpr3g1046 1011 SMART LRR_typ_2 403 426 IPR003591 -
Tpr3g1046 1011 SMART LRR_typ_2 130 151 IPR003591 -
Tpr3g1046 1011 SMART LRR_typ_2 227 251 IPR003591 -
Tpr3g1046 1011 SMART LRR_typ_2 475 499 IPR003591 -
Tpr3g1046 1011 SMART LRR_typ_2 451 474 IPR003591 -
Tpr3g1046 1011 SMART LRR_typ_2 571 594 IPR003591 -
Tpr3g1046 1011 SMART LRR_typ_2 300 324 IPR003591 -
Tpr3g1046 1011 SMART LRR_typ_2 595 620 IPR003591 -
Tpr3g1046 1011 SMART LRR_typ_2 155 179 IPR003591 -
Tpr3g1046 1011 SMART LRR_typ_2 106 129 IPR003591 -
Tpr3g1046 1011 SMART LRR_typ_2 427 450 IPR003591 -
Tpr3g1046 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Tpr3g1046 1011 Pfam Leucine rich repeat N-terminal domain 38 79 IPR013210 -
Tpr3g1046 1011 Gene3D Ribonuclease Inhibitor 38 145 IPR032675 -
Tpr3g1046 1011 Gene3D Ribonuclease Inhibitor 146 241 IPR032675 -
Tpr3g1046 1011 SUPERFAMILY RNI-like 256 613 - -
Tpr3g1046 1011 PANTHER OS04G0122200 PROTEIN 25 1007 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1046 Tpr-Chr3 9482062 9485740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1046 38 1009 Receptor kinase-like Gene Family AT3G47570 40.543 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr3g1046 Pkinase 3.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1046 - - gmx:100783512 1535.01