Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1045 ATGTCCTCTCTTCGGTCCCTCCAATTGCAGGATAACCAGATCACAGGATTCATTCCTAACCAAATTATCAAACTATATAGTTTGAGAGTTCTAAATATGAGCTCTAACAGATTTGAAGGAGTACTCTCTTCAAACCTTACCAACCTAAATGAGCTTCGGGTTCTTGATTTGTCCTCAAACAAGATTGTAAGCAGAATTCCCGAAGACATCAGCAGCTTGAAAAAGCTACATGCCTTGAAACTTGGAAGGAATAACCTCTATGGTACAATTCCAGCAACTCTAGGAAATATTTCTTCTTTGAAAAACATAAGTTTTGGCACCAACTTTCTTCATGGTTGGATTCCAAGTGACTTAGGTAGGCTACATAATTTAATTGAGCTTGATCTCACTATTAACAATCTTACTGGGACTGTTCCATCTGTTGTATACAACTTGTCTTCCCTTGTTAACTTGGCCTTAGCTGCAAACTCCTTTTGGGGTGAGATACCTTACAATGTTGGCCATAAACTTCCAAAACTACTAATTTTCAATTTCTGCTTCAATAAGTTCACAGGTAGAATTCCAGGGTCTCTGCACAACCTCACCAATATTAGGGTTATTCGCATGCTCTCTAACCATTTGGAAGGAACAGTTCCACCTGGTTTGGGAAATCTCCCATTTCTTCAATTGTATAATATTGGAAATAACAGGATAATCACCTCGGGAGTCAAAGGTTTGGAGTTCATTACTTCATTGGCAAACAGCACCCACTTGAACTTTCTAAACATTCAAGGCAATATGCTAGAAGGCGAAATTCCTGAAACCATTGGCAATCTCTCCAAGGATCTATCAATTTTATACATGGGAGGGAATCGTTTCAATGGAAGTATACCGTCTTCCATCAGCCGTCTTAGTGGCTTGAGGAGGCTAAACTTGAGCCACAATTCAATTAGTGGAGAGATTCCAAAGGAGTTAGGCCAGTTAGAGGAACTACAAGAGCTATATCTGGCTAGAAATAAGATATCAGGAGCTATTCCAAAATCCCTTGGTAATCTTCTAAATTTAAACAAGATTGATTTGTCAAGAAATGAACTTGTGGGTAAAATACCTATCAGTTTTGGGAATTTTCAAAATCTTCTCCACATGGACTTGTCTAGCAACAAGCTCAATGGAAACATACCTGCGGAAATTCTCAATCTTCCAACTCTGAGCATTGTTTTAAACTTATCTATGAACATGTTGAGTGGAAGTGGACCAATACCTCATGTTGGGAAATTGACTACCATTGCCTCTATTGACTTTTCCAACAACCAATTGAATGGCAGCATTCCAAGCTCATTCAGCAGTTGTTTGAGCTTGGAGAAATTGTTTTTGGCTAGAAATATGCTTTCAGGTTCCATTCCAAAATCTCTTGGAGATGTGAGAGCCTTGGAAACTTTAGACTTGTCCTCCAACCTACTCACAGGATGCATTCCTGTTGAACTTCAAAATCTGCACGTCCTTCAGCTTTTAAACCTCTCTTACAATGATTTAGAAGGAGCCATTCCTAGTGGTGGAGTTTTCAAAAATCTCTCTGATGTAGACTTTGAAGGAAATAAAAAATTATGCTTGCATGTTACATGTGTTCCTCAAGTCCATAGAAGAAGACATGTCGTACTTTATATCATAATAGCTGTTGCAGTAACATTGGTAGTACTGTGTCTCAAAATTGGCTTGCTCCTAAATTACAGAAAGGCGAAGGTAACAGCAACAACAGCATCTGAACAGCTAAAGCCACATGCTCGGATGGTCTCTTATGATGAGCTTCGCTTGGCAACTGAGGAGTTCATCCAAGAAAATTTAATAGGAATTGGGAGTTTTGGATCAGTGTATAAAGGCCGTTTAAGTCAGGGAAACACTATCGCAGTGAAAGTGCTTGACACTCTACGGACAGGTTCTTTAAAGAGTTTCTTTGCAGAGTGTGAAGCTATGAAGAACTCAAGGCACATAAATCTGGTGAAGCTAATCACGTCATGCTCTAGTGTTGACTTTAGAAACAATGATTTTCTGGCTTTGGTGTATGAGTATTTAAGTAATGGGAGCTTGGAAGATTGGATTAAGGGGAGGAGAAATCATGCAAATGGAAATGGTTTGAACCTTATGGAGAGAGTGAATATAGCTATAGATGTTGCTTGTGCATTAGATTACCTGCACAATGATAGTGAAACTCCTATTGTGCACTGTGATCTAAAACCAAGCAATATTCTCCTGGATGAAGATATGACTGCAAAGGTTGGAGACTTTGGTTTGGCTAGGTTGCTTATTCAAAGATCAACTGATCAAGTTTCTATCAGCTCCACTCATGTTCTTAGGGGTTCAATTGGTTACATACCTCCAGAGTATGGATGGGGAGAGAAACCATCTGCAGCAGGAGATGTATATAGTTTTGGGATAGTGTTACTAGAGCTCTTCTCTGGAAAAAGTCCACAAGATGATTGCTTCACAGGAGGCCTGAGCATAACAAAATGGGTGCAATATAACAAGTGTGTTCAAGTCATTGACGCTCATTTGCTATCTCTCATTTTACATGATGATCCTGCTAGAGAAGACTCTAATCTACAACTCATTTGTGTGGATGCAATTATGGGAGTTGCCATGTCCTGCACTGCAGATAATCCAGATGATCGCATTGGCATTAGAGCTGCTTTTCACCAGCTAAAAGCTGCTAGGGACAACTCTCTTATGAAAAAAATCTGA 2715 0.3945 MSSLRSLQLQDNQITGFIPNQIIKLYSLRVLNMSSNRFEGVLSSNLTNLNELRVLDLSSNKIVSRIPEDISSLKKLHALKLGRNNLYGTIPATLGNISSLKNISFGTNFLHGWIPSDLGRLHNLIELDLTINNLTGTVPSVVYNLSSLVNLALAANSFWGEIPYNVGHKLPKLLIFNFCFNKFTGRIPGSLHNLTNIRVIRMLSNHLEGTVPPGLGNLPFLQLYNIGNNRIITSGVKGLEFITSLANSTHLNFLNIQGNMLEGEIPETIGNLSKDLSILYMGGNRFNGSIPSSISRLSGLRRLNLSHNSISGEIPKELGQLEELQELYLARNKISGAIPKSLGNLLNLNKIDLSRNELVGKIPISFGNFQNLLHMDLSSNKLNGNIPAEILNLPTLSIVLNLSMNMLSGSGPIPHVGKLTTIASIDFSNNQLNGSIPSSFSSCLSLEKLFLARNMLSGSIPKSLGDVRALETLDLSSNLLTGCIPVELQNLHVLQLLNLSYNDLEGAIPSGGVFKNLSDVDFEGNKKLCLHVTCVPQVHRRRHVVLYIIIAVAVTLVVLCLKIGLLLNYRKAKVTATTASEQLKPHARMVSYDELRLATEEFIQENLIGIGSFGSVYKGRLSQGNTIAVKVLDTLRTGSLKSFFAECEAMKNSRHINLVKLITSCSSVDFRNNDFLALVYEYLSNGSLEDWIKGRRNHANGNGLNLMERVNIAIDVACALDYLHNDSETPIVHCDLKPSNILLDEDMTAKVGDFGLARLLIQRSTDQVSISSTHVLRGSIGYIPPEYGWGEKPSAAGDVYSFGIVLLELFSGKSPQDDCFTGGLSITKWVQYNKCVQVIDAHLLSLILHDDPAREDSNLQLICVDAIMGVAMSCTADNPDDRIGIRAAFHQLKAARDNSLMKKI* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1045 904 Gene3D Phosphorylase Kinase; domain 1 572 682 - -
Tpr3g1045 904 Gene3D Transferase(Phosphotransferase) domain 1 683 903 - -
Tpr3g1045 904 PANTHER OS04G0122200 PROTEIN 1 899 - -
Tpr3g1045 904 ProSiteProfiles Leucine-rich repeat profile. 51 73 IPR001611 GO:0005515
Tpr3g1045 904 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 1 899 - -
Tpr3g1045 904 Gene3D Ribonuclease Inhibitor 1 238 IPR032675 -
Tpr3g1045 904 Gene3D Ribonuclease Inhibitor 239 537 IPR032675 -
Tpr3g1045 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Tpr3g1045 904 SUPERFAMILY Protein kinase-like (PK-like) 583 892 IPR011009 -
Tpr3g1045 904 SMART LRR_typ_2 491 516 IPR003591 -
Tpr3g1045 904 SMART LRR_typ_2 467 490 IPR003591 -
Tpr3g1045 904 SMART LRR_typ_2 369 393 IPR003591 -
Tpr3g1045 904 SMART LRR_typ_2 297 320 IPR003591 -
Tpr3g1045 904 SMART LRR_typ_2 1 25 IPR003591 -
Tpr3g1045 904 SMART LRR_typ_2 121 145 IPR003591 -
Tpr3g1045 904 SMART LRR_typ_2 49 73 IPR003591 -
Tpr3g1045 904 SMART LRR_typ_2 321 345 IPR003591 -
Tpr3g1045 904 SUPERFAMILY L domain-like 276 529 - -
Tpr3g1045 904 SUPERFAMILY L domain-like 2 232 - -
Tpr3g1045 904 ProSiteProfiles Protein kinase domain profile. 602 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1045 904 SMART LRR_sd22_2 273 299 - -
Tpr3g1045 904 SMART LRR_sd22_2 49 72 - -
Tpr3g1045 904 SMART LRR_sd22_2 321 347 - -
Tpr3g1045 904 SMART LRR_sd22_2 467 488 - -
Tpr3g1045 904 SMART LRR_sd22_2 121 147 - -
Tpr3g1045 904 Pfam Leucine rich repeat 276 334 IPR001611 GO:0005515
Tpr3g1045 904 Pfam Leucine rich repeat 27 86 IPR001611 GO:0005515
Tpr3g1045 904 Pfam Leucine rich repeat 445 504 IPR001611 GO:0005515
Tpr3g1045 904 SMART serkin_6 602 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1045 904 ProSitePatterns Protein kinases ATP-binding region signature. 608 630 IPR017441 GO:0005524
Tpr3g1045 904 Pfam Protein kinase domain 604 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1045 Tpr-Chr3 9476683 9480234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1045 1 897 Receptor kinase-like Gene Family AT3G47570 39.653 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr3g1045 Pkinase 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1045 - - gmx:102664710 1316.21