Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1015 ATGTCAGAGACTAACGACTGCGCCGCCACCGTCACCGCCGGTGGTGGTTACCGGAGTACATTTCCAAGGTCAGTTTCATGGACTGACCATTCACCTTCAAACAGAAAACCACCTCATGCGGCAGCGAAAAACAGACAGCTTCGTCCTCTTTCTATCAACAAACGTAGCATTGAAGAATGGCCAAGTGCTGGATCTGACGATCTTGGAGTTTGGCCACAAGCAGATACACCAAGAGGAAGAGGTTCAATCACTGGTTCAGAGTTTCAGTTCAAAAGAGACAAGTTAGCTTTTTATGACAAAGAATGTTCTAGAATTGCTGAACATGTGTACCTAGGAAGTGACACGGTTGCTAAGAATCATGAGCTTCTAAGACAGAATGGGATTACTCATGTGCTTAATTGTGTTGGGTTTGTTTGTCCTGAATATTTTAAAAGTGAGTTTGTTTATAAAACTCTTTGGTTGCAGGATAGTCCAACAGAAGATATAACGAGTATTTTGTATGATGTTTTTGATTATTTTGAGGATGTTAGATTACAAGGTGGTCGTGTTCTTGTTCATTGTTGTCAAGGTGTTTCTAGATCAACATCTTTGGTCATTGCTTATCTTATGTGGAGAGAAGGACAAAGCTTTGAAGATGCTTTTCATTATGTCAAGAATGCTCGTGGTGTTACAAATCCTAACATGGGTTTTGCTTGTCAGCTTTTGATGTGTCAGAAAAGAGTGGTAAATGTACATTCAAATGCAAATGGTAATGTTAATGTTATGCCTTCAAGTCCTAATTCTGTTCTTAGGATGTATAGAATGGCTCCTCATTCACCTTATGACCCTCTTCATGTGGTACCTAAAATGGTTGACAAGCCTTGTGCTAAAGCGCTCGATTCTCGTGGTGCTTTTATTGTTCATGTTCCTTCTGCTATATATGTTTGGATTGGTAAAAATTGTAGTTCTGTTATTTCTTGTAATGCACAATCTGCAGCTACGCAGGTTGTTCGTTATGAGAAAGCAAATGCTCCGATTCTTAGCATTTATGAAGGTGAAGAGCCAATGGAGTTTTGGGTTGCTCTTTCTAACCAGGAACTGGTGGAGAAGGAAAGAATGGAGATTGATGGTGATATGGGGATTCATCTTAGGAAAGTCGATGATTACGATTTGGATTTTGGGATATTTCACAAAGCACTTGCTGGTGGTGTTGTTCCACCTTTTTCTGTGTCTAATACAGGATCAGAAACTTTGCTTCCTGATAGAGAAAATGGCTGGGGAAGACTAAGGAGGAAGCTTGCTAATAGTATCATGAAAGGTTTGTTTACATCCTCCAAATGTTGTGATACAACCTCACCTAAAGATGAATTATTAAGGGAGAATGTGGAAGAAGATGAAAAACAACATTCAGTTGTTGATCATTCCTCAAAGCATCTTTCTGGTTCATCTAGTTACATTGAATATGTTGTTGATCACAGCTCTGACAAGGCAAAAGATAGTCTCGTATTCATGGATCGCTTTGTTCCTAATGTTGGTTCATCATTGCCACCAACTCATCGAAAATTGGATTCTTTTCCTTGTTCTTTAAGTAACAGCCCAAAATTCAGTTCAAAGTCGCCAACCCTTTCTCCTTCCAATTCTGATTGTGCTAGCTCCTTCACATTTTCGCCTGCGTCTACAAATTGGTCTGATTTGTCATTCTTGTCATCTCGGCAGCCATCGCCTTCTGGACTTGAATCATCTGAACAACCCTTTTATCTTAATAAAGATGCATCTTTGTTAGAAAGATCCTCTTCACTTCGGAACGCTGCTGTCTCTTCATCTTCAGAGACACTTTCGGTTAATCAAAGCATGGTACGGACAAACTCCTACAAAGGGCCGAAATCTAACCTCTCCATTGCGGAGCGCAGGGGGAGTAAACCGCCACCTCAAATGTTCGTAACTTCTGTTAGCGAATCATTGCGTGCTCACAAAGTTCTGGTAAGATCGCAGACATTCACTTTGCCCAACCGAGACGATAATTTGATGTAG 2010 0.4055 MSETNDCAATVTAGGGYRSTFPRSVSWTDHSPSNRKPPHAAAKNRQLRPLSINKRSIEEWPSAGSDDLGVWPQADTPRGRGSITGSEFQFKRDKLAFYDKECSRIAEHVYLGSDTVAKNHELLRQNGITHVLNCVGFVCPEYFKSEFVYKTLWLQDSPTEDITSILYDVFDYFEDVRLQGGRVLVHCCQGVSRSTSLVIAYLMWREGQSFEDAFHYVKNARGVTNPNMGFACQLLMCQKRVVNVHSNANGNVNVMPSSPNSVLRMYRMAPHSPYDPLHVVPKMVDKPCAKALDSRGAFIVHVPSAIYVWIGKNCSSVISCNAQSAATQVVRYEKANAPILSIYEGEEPMEFWVALSNQELVEKERMEIDGDMGIHLRKVDDYDLDFGIFHKALAGGVVPPFSVSNTGSETLLPDRENGWGRLRRKLANSIMKGLFTSSKCCDTTSPKDELLRENVEEDEKQHSVVDHSSKHLSGSSSYIEYVVDHSSDKAKDSLVFMDRFVPNVGSSLPPTHRKLDSFPCSLSNSPKFSSKSPTLSPSNSDCASSFTFSPASTNWSDLSFLSSRQPSPSGLESSEQPFYLNKDASLLERSSSLRNAAVSSSSETLSVNQSMVRTNSYKGPKSNLSIAERRGSKPPPQMFVTSVSESLRAHKVLVRSQTFTLPNRDDNLM* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1015 669 Pfam Dual specificity phosphatase, catalytic domain 109 239 IPR000340 GO:0008138|GO:0016311
Tpr3g1015 669 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 42 634 - -
Tpr3g1015 669 ProSiteProfiles Dual specificity protein phosphatase domain profile. 101 243 IPR020422 GO:0006470|GO:0008138
Tpr3g1015 669 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 93 242 IPR029021 -
Tpr3g1015 669 SMART dsp_5 101 240 IPR020422 GO:0006470|GO:0008138
Tpr3g1015 669 MobiDBLite consensus disorder prediction 23 48 - -
Tpr3g1015 669 Gene3D Protein tyrosine phosphatase superfamily 83 242 IPR029021 -
Tpr3g1015 669 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 160 221 IPR000387 GO:0016311|GO:0016791
Tpr3g1015 669 SMART VILL_6 267 358 IPR007122 GO:0051015
Tpr3g1015 669 PANTHER MKPA PROTEIN 42 634 - -
Tpr3g1015 669 SUPERFAMILY Actin depolymerizing proteins 258 358 - -
Tpr3g1015 669 Gene3D Severin 264 362 IPR029006 -
Tpr3g1015 669 CDD DSP 102 236 - -
Tpr3g1015 669 ProSitePatterns Tyrosine specific protein phosphatases active site. 185 195 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1015 Tpr-Chr3 9271194 9273862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1015 47 137 Protein tyrosine phosphatase (PTP) family AT3G55270 47.222 2.25e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1015 - - gmx:100782633 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1015 3 9271194 9273862 Tpr3g1015 3 9271194 9273862 ECH