Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1010 ATGTCGAAACCCTGGGGCAACATCGGAGCTTGGGCCGCCGATTCCGAGGCAGCCGAAGCCGAGGAACGTGAAGCCGCGGCTAAGGAAGCTTCCGCCGGGTCAGATAACTTCCCGAGTCTCAAAGAAGCCGTTACTGCTAAACCGAAGAAGAATAAGAAGATGTCTCTTTCTGAGTTCGCACGTGGCGGTTACTCTTCCGGTGGTGGCGCTACCGATTATCCTCGATTGACACCGGATGAAATGCTTCGGCTTCCTACCGGTCCTAAGGAGCGTTCTGCTGAGGAAATGCAGTATAACCGTCTTGGTGGTGGTTTTTCAAATTTTGACCGTGGTGGTCGTGGTAGGGATCGTGATGGTGGCTCTGGAGATGGTAATTGGGGTGCTGGAAGAAGATCTTATGGTGGATTTGATGATGAACGTAGGACTCCGAATTCTAGGGTTTCGGAATTTGATCAACCGTCGAGGGCTGATGAGGTGGATAATTGGGCTTCGGTGAAGAAGACACTTCCTTCGTTTGATTCCGGTAGGCAGAATCGATATGGGGGTGGTGGTGGCGGTGGTGATCGATATGGGGGTGGTGCTGGCGGTGGTGATCGATATGGGGGTGGCGGTGGTGGTGGTTTTAGTGGTGAATCTAAGGCTGATGGAGTGGACAATTGGGCGGTTGGTAAGAAACCTCTACCTGTTAGATCTTCTGGTTATGGTTATCGTGATTCTGGAACCGAACCAGATCGGTGGTCTAGGGGTTCTGCTGTTGAACCAGATCGTTGGTCCAGAGGTGCACCTCGTGAAACGGAGCAGCAACGAACGAGGTTGGTGTTGGATCCAAGGAAAACTGATGGTTCTGTGAATGAAGCTCCAGTGGCAAAGACAAATAAGCCGAATCCATTTGGTGCGGCGAGGCCTAGGGAGGAAGTGTTAGCTGAGAAAGGATATGATTGGAAGAAGCTGGATTCTGAGATTGAAGCAAAAAATAGGCCTACAAGTTCACATTCTAGCAGGCCTTCAAGTGCTCAGTCCAATCGCTCTGAGGGTCCAGATGGTGCGGTGAAACCGAGGCCAAAGGTGAATCCTTTTGGGGATGCCAAACCCAGGGAGGTTTTGCTTAGCGAGCGTGGCAAGGATTGGCGGAAGATTGATCTGGAATTGGAGCATCGTGCTGTTGATAGGCCTGAGACCGAGGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTGAAGAAGGAACTTGAGAAGGAGCCTACGATAAATTCAAATAAGGAATCTGCGGATGATGCTGGTGTAGACCAAACTGGTACGCGTGCAGTGCTACAAGAGAAAGAAAGGGAGCTGGAACTACTTATCCGTGATTTGGATGATAAAGTTCGTTTTGGGCAGAAAGCTGTTGAAAGGCCAGGTTCGTCAGCAGGAAAGACTGCTGGTTTTTCTGATAGGCCACCATCTCGTTCTGGCTCATTTGAGGATTCTAGAAGTGTGGATTTTACGGACCGACCTCGATCCCGTGGTACAGGAGATATGTCGATGCGTCCTACTGATGACAGAAGACAATTTCAAGGTAGCAAGGAAAGAGGGTGGTTTGCGAACAGCAGAGACTTGAATAGGTCAAGGTCCAGAGAGAGATGGTGA 1626 0.4969 MSKPWGNIGAWAADSEAAEAEEREAAAKEASAGSDNFPSLKEAVTAKPKKNKKMSLSEFARGGYSSGGGATDYPRLTPDEMLRLPTGPKERSAEEMQYNRLGGGFSNFDRGGRGRDRDGGSGDGNWGAGRRSYGGFDDERRTPNSRVSEFDQPSRADEVDNWASVKKTLPSFDSGRQNRYGGGGGGGDRYGGGAGGGDRYGGGGGGGFSGESKADGVDNWAVGKKPLPVRSSGYGYRDSGTEPDRWSRGSAVEPDRWSRGAPRETEQQRTRLVLDPRKTDGSVNEAPVAKTNKPNPFGAARPREEVLAEKGYDWKKLDSEIEAKNRPTSSHSSRPSSAQSNRSEGPDGAVKPRPKVNPFGDAKPREVLLSERGKDWRKIDLELEHRAVDRPETEEEKLLKEEIDNLKKELEKEPTINSNKESADDAGVDQTGTRAVLQEKERELELLIRDLDDKVRFGQKAVERPGSSAGKTAGFSDRPPSRSGSFEDSRSVDFTDRPRSRGTGDMSMRPTDDRRQFQGSKERGWFANSRDLNRSRSRERW* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1010 541 MobiDBLite consensus disorder prediction 527 541 - -
Tpr3g1010 541 MobiDBLite consensus disorder prediction 133 162 - -
Tpr3g1010 541 Coils Coil 434 454 - -
Tpr3g1010 541 MobiDBLite consensus disorder prediction 219 371 - -
Tpr3g1010 541 MobiDBLite consensus disorder prediction 408 438 - -
Tpr3g1010 541 MobiDBLite consensus disorder prediction 489 520 - -
Tpr3g1010 541 MobiDBLite consensus disorder prediction 303 327 - -
Tpr3g1010 541 MobiDBLite consensus disorder prediction 241 278 - -
Tpr3g1010 541 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 541 - -
Tpr3g1010 541 Coils Coil 393 413 - -
Tpr3g1010 541 MobiDBLite consensus disorder prediction 459 541 - -
Tpr3g1010 541 Pfam Plant specific eukaryotic initiation factor 4B 1 524 IPR010433 GO:0003743
Tpr3g1010 541 MobiDBLite consensus disorder prediction 1 192 - -
Tpr3g1010 541 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 541 IPR010433 GO:0003743
Tpr3g1010 541 MobiDBLite consensus disorder prediction 328 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1010 Tpr-Chr3 9236564 9243059 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1010 1 541 Eukaryotic Initiation Factors Gene Family AT3G26400 53.860 2.66e-153 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1010 - - gmx:100784238 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1010 3 9236564 9243059 Tpr3g1010 3 9236564 9243059 ECH