Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0999 ATGGATGAAGAGGAACACCAACAACAAGTTTTGAGAAAAAACAAAGAGGAACAAAGTCCAAGGAACAACAACGTGTATGGAAGGGAATTTCAATCGATGTTAGAAGGACTAGATGAAGAAGGTTGTGTTGAAGAACCAGGACAGAAGAAAAGAAGACTAAGTGTGGATCAAGTTAAGGCTTTGGAGAAGAATTTTGAAGTTGAAAACAAGCTTGAACCTGATAGAAAAGTTAAGCTTGCTCAAGAACTTGGCTTGCAACCAAGACAAGTTGCTGTTTGGTTTCAAAACCGTCGTGCTAGATGGAAAACAAAACAGTTGGAAAGAGATTATGGTGTTCTTAAAGCCAAGTATGATGCACTTAAGCTTAATCATGACAATCTTCAACGTGACAATGAAAATTTGCACAAAGAGGTTAAGGAATTGAAATCAAGATTACAATTACAAGAAGAAAACACAACTACTGAAAGTGATGTTTGTGTGAAACAAGAGTTGCTGACAATGCAAGAATCAGAAAACACCAATTTTGATGAAACTGCCATTCTTAGATCCGATTCTAAGGACTTAAACTACGACTGTTTCAAAGGTGATGTAGTAGCTTCTCTGTTTCCTGCTGATTTCAAAGATGGTTCTTCAGATAGCGACTCAAGTGCAATCTTGAATGAAGAAAACAACAGTCCCAACGCAGCGATTTCTTCATCTGGGGTTCTTCAAAATCATAACTTTTTTATGTCTCCTGGTTCTTCTTCACTTAAGTTCAATTGTTCTGAATCGTCTTCGCCATCTTCAATGAGTAGCTTTCAGTTTCAGACACAATATGTGAAAATGGAAGAGCATAATTTTCTTGGTACTGATGAGACTTGTGATTTCTTCTCAGATGAACAACCACCAACTCTTCAATGGTGGAATTAA 909 0.3707 MDEEEHQQQVLRKNKEEQSPRNNNVYGREFQSMLEGLDEEGCVEEPGQKKRRLSVDQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKAKYDALKLNHDNLQRDNENLHKEVKELKSRLQLQEENTTTESDVCVKQELLTMQESENTNFDETAILRSDSKDLNYDCFKGDVVASLFPADFKDGSSDSDSSAILNEENNSPNAAISSSGVLQNHNFFMSPGSSSLKFNCSESSSPSSMSSFQFQTQYVKMEEHNFLGTDETCDFFSDEQPPTLQWWN* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0999 302 ProSitePatterns 'Homeobox' domain signature. 79 102 IPR017970 GO:0000981|GO:0006355
Tpr3g0999 302 Coils Coil 103 151 - -
Tpr3g0999 302 SMART HOX_1 47 108 IPR001356 GO:0003677
Tpr3g0999 302 Gene3D - 47 111 - -
Tpr3g0999 302 PRINTS Lambda-repressor HTH signature 75 84 IPR000047 GO:0003677
Tpr3g0999 302 PRINTS Lambda-repressor HTH signature 84 100 IPR000047 GO:0003677
Tpr3g0999 302 Pfam Homeodomain 49 102 IPR001356 GO:0003677
Tpr3g0999 302 MobiDBLite consensus disorder prediction 1 19 - -
Tpr3g0999 302 SUPERFAMILY Homeodomain-like 44 106 IPR009057 -
Tpr3g0999 302 Pfam Homeobox associated leucine zipper 104 146 IPR003106 GO:0006355|GO:0043565
Tpr3g0999 302 MobiDBLite consensus disorder prediction 1 26 - -
Tpr3g0999 302 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6-LIKE 15 297 - -
Tpr3g0999 302 CDD homeodomain 48 105 IPR001356 GO:0003677
Tpr3g0999 302 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 15 297 IPR045224 GO:0003700
Tpr3g0999 302 ProSiteProfiles 'Homeobox' domain profile. 44 104 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0999 Tpr-Chr3 9141726 9144915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0999 16 302 Homeobox Transcription Factor Family AT2G22430 45.714 1.09e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Tpr3g0999 Homeodomain 6.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0999 K09338 - gmx:100796213 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0999 3 9141726 9144915 Tpr3g0999 3 9141726 9144915 ECH