Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr3g0999 | ATGGATGAAGAGGAACACCAACAACAAGTTTTGAGAAAAAACAAAGAGGAACAAAGTCCAAGGAACAACAACGTGTATGGAAGGGAATTTCAATCGATGTTAGAAGGACTAGATGAAGAAGGTTGTGTTGAAGAACCAGGACAGAAGAAAAGAAGACTAAGTGTGGATCAAGTTAAGGCTTTGGAGAAGAATTTTGAAGTTGAAAACAAGCTTGAACCTGATAGAAAAGTTAAGCTTGCTCAAGAACTTGGCTTGCAACCAAGACAAGTTGCTGTTTGGTTTCAAAACCGTCGTGCTAGATGGAAAACAAAACAGTTGGAAAGAGATTATGGTGTTCTTAAAGCCAAGTATGATGCACTTAAGCTTAATCATGACAATCTTCAACGTGACAATGAAAATTTGCACAAAGAGGTTAAGGAATTGAAATCAAGATTACAATTACAAGAAGAAAACACAACTACTGAAAGTGATGTTTGTGTGAAACAAGAGTTGCTGACAATGCAAGAATCAGAAAACACCAATTTTGATGAAACTGCCATTCTTAGATCCGATTCTAAGGACTTAAACTACGACTGTTTCAAAGGTGATGTAGTAGCTTCTCTGTTTCCTGCTGATTTCAAAGATGGTTCTTCAGATAGCGACTCAAGTGCAATCTTGAATGAAGAAAACAACAGTCCCAACGCAGCGATTTCTTCATCTGGGGTTCTTCAAAATCATAACTTTTTTATGTCTCCTGGTTCTTCTTCACTTAAGTTCAATTGTTCTGAATCGTCTTCGCCATCTTCAATGAGTAGCTTTCAGTTTCAGACACAATATGTGAAAATGGAAGAGCATAATTTTCTTGGTACTGATGAGACTTGTGATTTCTTCTCAGATGAACAACCACCAACTCTTCAATGGTGGAATTAA | 909 | 0.3707 | MDEEEHQQQVLRKNKEEQSPRNNNVYGREFQSMLEGLDEEGCVEEPGQKKRRLSVDQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKAKYDALKLNHDNLQRDNENLHKEVKELKSRLQLQEENTTTESDVCVKQELLTMQESENTNFDETAILRSDSKDLNYDCFKGDVVASLFPADFKDGSSDSDSSAILNEENNSPNAAISSSGVLQNHNFFMSPGSSSLKFNCSESSSPSSMSSFQFQTQYVKMEEHNFLGTDETCDFFSDEQPPTLQWWN* | 303 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr3g0999 | 302 | ProSitePatterns | 'Homeobox' domain signature. | 79 | 102 | IPR017970 | GO:0000981|GO:0006355 | |
Tpr3g0999 | 302 | Coils | Coil | 103 | 151 | - | - | |
Tpr3g0999 | 302 | SMART | HOX_1 | 47 | 108 | IPR001356 | GO:0003677 | |
Tpr3g0999 | 302 | Gene3D | - | 47 | 111 | - | - | |
Tpr3g0999 | 302 | PRINTS | Lambda-repressor HTH signature | 75 | 84 | IPR000047 | GO:0003677 | |
Tpr3g0999 | 302 | PRINTS | Lambda-repressor HTH signature | 84 | 100 | IPR000047 | GO:0003677 | |
Tpr3g0999 | 302 | Pfam | Homeodomain | 49 | 102 | IPR001356 | GO:0003677 | |
Tpr3g0999 | 302 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Tpr3g0999 | 302 | SUPERFAMILY | Homeodomain-like | 44 | 106 | IPR009057 | - | |
Tpr3g0999 | 302 | Pfam | Homeobox associated leucine zipper | 104 | 146 | IPR003106 | GO:0006355|GO:0043565 | |
Tpr3g0999 | 302 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Tpr3g0999 | 302 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6-LIKE | 15 | 297 | - | - | |
Tpr3g0999 | 302 | CDD | homeodomain | 48 | 105 | IPR001356 | GO:0003677 | |
Tpr3g0999 | 302 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN | 15 | 297 | IPR045224 | GO:0003700 | |
Tpr3g0999 | 302 | ProSiteProfiles | 'Homeobox' domain profile. | 44 | 104 | IPR001356 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr3g0999 | Tpr-Chr3 | 9141726 | 9144915 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr3g0999 | 16 | 302 | Homeobox Transcription Factor Family | AT2G22430 | 45.714 | 1.09e-69 | 217 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-HD-ZIP | Tpr3g0999 | Homeodomain | 6.1e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr3g0999 | K09338 | - | gmx:100796213 | 373.244 |