LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr3g0978	TTTCCTTACACAGTGAAAGAAATACGTGCTTGGTTTGGTTCCATATGTGATTTGATAAACTGCTTAATTTTGAAATCACTTATAAAGGCAGAGAAGCTATCAAAGAGAAGAGAAGTGTCCAATGTGGTTTTGGATTTTTCTGTAAGAACTGCAACCACGCACAGTCCACAGTTTCTTGGTCTGCAGCAGGGAGCTTTGGTTTCAATCGGTGGATTTGAAACTGCTGGAGAAGGAATCACTATTGCATTTGTTGACACTGGCATTGATCCTACACACCCAAGTTTCGCTGATGATAAATCTGAACATCCATTCAAATTTCCTGCTCGTTTTTCTGGCACCTGTGAGGTTACTCCGGATTTTCCATCTGATTCTTGCAATAGGAAGCTTGTTGGGGCCCGTCATTTTGCAGCATCTGCTATAACCAGAGGAATGTTTGATTCAAATGAGGACTATGCTTCTCCCTTCGACGGTGATGGCCATGGCACGAACACAGCTTCTATTGCAGCTGGAAACCATGGAATTCCAGTGGTTGTTGCTGGGTATCATTTTGGTAATGCTAGTGGAATGGCTCCTCGCTCGCAGATTGCTGTTTACAAGGCACTATACATGGGATTTGGAGGATTTGCTGCAGATGTTGTTGCAGCTATTGATCAGGCAGCTCAAGATAGGGTTGATATAATATGCCTGTCAATCACTCCTAATATGCGTCCTCCCGGTATTGCAACTTTCTTCAATCCAATAGACATGCCATTGTTGTCAGCTATAAAATCTGGTATCTTTGTTGTGCAAGCTTATGGAAATACTGGACCATCGTCTATGAGCATGTCCTCCTTTAGTCCGTGGATTTTTACTATTGGTGCCACCTCTCATGATCGACTTTATACCAACTCGCTATCTCTTGGAAATAATGTGACTATACTCGGAGTTGGACTTGCACCTAGCACATCTGAGAATACAATGTACAAATTGATTCATGCACATCATGCTTTGAACGATGACACAACAATTGCTGATGATATGTATGTTGGTGAGTGTCAAGATGCAAGTAAGTTCAATAAAGATTTGGTCCAAGGAAACCTCCTAATGTGTAGTTATACAATGCGGTTTGTTCTCGGTCTCTCCAGCATCAACAAGGCCTTAGAAACAGCCATGAATCTTAGTGCTGCTGGTGTTGTTTTCCCCATGAATCCTTCTGTCAACGGTTTTGAACTTAACCCAATTCCAATGAAAATTCCCGGCATAATTATTCCATTAGCAACTGATTCCAAGATATTACTAGAATACTACAATTCTTTGATAGAAAAAGACGGTACTTCAAAAATTGTTAAACTTGGGGCTTTTGCTAGCATTAATGGCGGACTAACGGCGAGCTATAGTAATGTTGCCCCTAGTGTTATGTATTACTCTGCAAGAGGACCAGATCCAGAAGACAGTCTTCCTCATGAAGCTGACATTTTGAAACCCATTCTGGTAGCTCCTGGAAGTTTAATATGGGCTGCTTGGAGTTCTGTTGTCACTGATTCAGATGAATTTCTAGGTGAAAATTTTGCAATGATGTCTGGCACAAGCATGGCTGCACCTCATGTTGCTGGTCTTGCTGCACTAATCAAGCAAAAGTTTCCCAATTTCAGTCCTGCTGCCATTGGATCTTCACTTTCCACCATGGCATCTCTGGATGACAACAGTGGGAAGCCAATAATGGCTCAGCGGACATATCCCTCCCCGGACCTAAACAAATCTCCAGCAACTCCCTTTGACATGGGAAGTGGTTTTGTAAATGCTACGGCAGCATTAAACCCAGGATTGTTTTTTGATTCAAGTTATGATGATTACATGTCGTTTCTATGTGGTATTAATGGTTCAGCCTCTGCAGTGGTAGACTACACTGGTCAGAATTGTTGGATTCATAACTCGACTGTATATGGCTCTGATCTAAACTTGCCCTCAATCACTATAGCAAGGTTGGACCAATCTAGAGTAGTGCAGAGAACAGTACAAAACATTGCTGGAAATGAAACTTATAGTGTTGGTTGGAGTTCTCCATATGGAGTTTCAGTGAAAGTATCTCCAACTCGCTTCTCTATCGCCAATGGAGAGAGACAAGTCTTATCTGTGATCTTCAATGCAACAGGCAACAGCTCTACTGCCAGCTATGGAAGGATTGGATTGTTTGGTAATCAAGGTCACATAGTCAACATTCCTGTGTCAGTCATCGTTAAAATCTCACTATGA	2232	0.4194	FPYTVKEIRAWFGSICDLINCLILKSLIKAEKLSKRREVSNVVLDFSVRTATTHSPQFLGLQQGALVSIGGFETAGEGITIAFVDTGIDPTHPSFADDKSEHPFKFPARFSGTCEVTPDFPSDSCNRKLVGARHFAASAITRGMFDSNEDYASPFDGDGHGTNTASIAAGNHGIPVVVAGYHFGNASGMAPRSQIAVYKALYMGFGGFAADVVAAIDQAAQDRVDIICLSITPNMRPPGIATFFNPIDMPLLSAIKSGIFVVQAYGNTGPSSMSMSSFSPWIFTIGATSHDRLYTNSLSLGNNVTILGVGLAPSTSENTMYKLIHAHHALNDDTTIADDMYVGECQDASKFNKDLVQGNLLMCSYTMRFVLGLSSINKALETAMNLSAAGVVFPMNPSVNGFELNPIPMKIPGIIIPLATDSKILLEYYNSLIEKDGTSKIVKLGAFASINGGLTASYSNVAPSVMYYSARGPDPEDSLPHEADILKPILVAPGSLIWAAWSSVVTDSDEFLGENFAMMSGTSMAAPHVAGLAALIKQKFPNFSPAAIGSSLSTMASLDDNSGKPIMAQRTYPSPDLNKSPATPFDMGSGFVNATAALNPGLFFDSSYDDYMSFLCGINGSASAVVDYTGQNCWIHNSTVYGSDLNLPSITIARLDQSRVVQRTVQNIAGNETYSVGWSSPYGVSVKVSPTRFSIANGERQVLSVIFNATGNSSTASYGRIGLFGNQGHIVNIPVSVIVKISL*	744

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr3g0978	743	ProSiteProfiles	Serine proteases, subtilase domain profile.	55	598	-	-
	Tpr3g0978	743	Pfam	Fibronectin type-III domain	644	737	IPR041469	-
	Tpr3g0978	743	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	81	92	IPR023827	-
	Tpr3g0978	743	Gene3D	-	615	739	-	-
	Tpr3g0978	743	PANTHER	TRIPEPTIDYL-PEPTIDASE II-RELATED	29	741	-	-
	Tpr3g0978	743	CDD	PA_subtilisin_like	297	431	-	-
	Tpr3g0978	743	CDD	Peptidases_S8_3	51	557	IPR034197	-
	Tpr3g0978	743	Pfam	Subtilase family	76	556	IPR000209	GO:0006508\|GO:0008236
	Tpr3g0978	743	Gene3D	Peptidase S8/S53 domain	78	611	IPR036852	GO:0004252\|GO:0006508
	Tpr3g0978	743	PRINTS	Subtilisin serine protease family (S8) signature	76	95	IPR015500	-
	Tpr3g0978	743	PRINTS	Subtilisin serine protease family (S8) signature	156	169	IPR015500	-
	Tpr3g0978	743	PRINTS	Subtilisin serine protease family (S8) signature	520	536	IPR015500	-
	Tpr3g0978	743	SUPERFAMILY	Subtilisin-like	52	602	IPR036852	GO:0004252\|GO:0006508
	Tpr3g0978	743	ProSitePatterns	Serine proteases, subtilase family, serine active site.	521	531	IPR023828	-
	Tpr3g0978	743	Gene3D	-	291	457	-	-
	Tpr3g0978	743	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	29	741	IPR045051	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr3g0978	Tpr-Chr3	8936829	8940962	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr3g0978	18	742	Subtilisin-like Serine Gene Family	AT4G20430	67.764	0.0	1006

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr3g0978	-		-	gmx:100814065	1149.42