Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0977 ATGGCTTTGTTTTCTCATTCACATCTTCATATTTTTTCCTTATTAATGATCCTTATTATCCACTTTGATTTCAACAACCTTGTTGTATCATCAACCACTCTAAGCATCACCACAGACAAAGAAGCCTTGATCTCATTAAAATCTCAATTAAGTAATAATGACACTTCTAGTTCTCACCCATTATCCTCTTGGAGCCATAATTCATCTCCTTGCAATTGGACTGGTGTCCTATGTGACAAGCATAACCAAAGAGTGACTGGCCTGGACCTTTCAGGCTTTGGATTCTCAGGTAACTTAAGCCCTTGTATAGGTAACTTGTCCTCTCTTCAATCCCTCCAATTGCAGGATAACCAGCTCACAGGAATCATTCCTAGCCAAATCACCAATCTATATAGTTTGAGAGTCCTAAATATGAGTTCTAACAGATTTGAAGGAATCATGATCCCTTCAAATCTTACCAATTTAGATGAGCTTCAAATTCTTGATTTGTCCTCAAACAAGATTGTAAGTAGAATTCCTGAAGACATCAGCAGCTTGAAAAAGCTGCAGGTGTTGAAACTTGGAAGGAATAGCTTCTATGGTACAATTCCACAATCTCTAGGAAATATTTCTTCTCTAAAGAATATAAGTTTCGGCACCAACTCTCTTACTGGCTGGATTCCTAGTGAATTAGGTAAGTTACATAATTTAATTGAGCTTGATCTCACTCTTAACAATCTTACTGGAATTGTTCCACCAGTAATATACAATTTATCTTCCCTTGTTAACTTGGCCTTAGCTGCAAACTCCTTTTGGGGTGAGATACCTTATGATGTTGGTCATAAACTTCCAAAACTACTAGTTTTCAATTTCTGCTTCAATAAGTTCACAGGTAGAATTCCAGGGTCTTTGCACAACCTCACAAACATTAGGGTCATTCGTATGGCCTATAACCGTTTGGAAGGAACAGTTCCACCTGGTTTAGGAAACCTTCCATTTCTTCACATGTATAATATTGGCCATAACAAGATAGTCACCTCAGGAGTCAATAGTTTGGACTTCATTACTTCATTGACAAACAGCACTCACTTGAAATTTCTAGCAATTGATGGAAATATGCTTGAAGGTGTGATTCCTGAAACCATTGGCAATCTCTCAAAGGAACTCTCAAACTTATACATGGGAGGAAATCGTTTCAATGGAAGTATACCATCATCCATTGGTCTTCTTAGCGGCTTGAAGTTGTTAAACTTAAGCCACAATTCAATCAGTGGTGAGATTCCAAAGGAGTTAGGACAGTTAGACGAACTCCAAGAGCTATATCTGGATGGAAATAAGATATCAGGAGCTATTCCAAATTCTCTTGGTAATCTTATAAAGTTAAACAAGATTGATTTGTCAAAAAATGAACTTGTGAGTAGAATACCAATCAGTTTTGGTAATTTTCAAAACCTGCTCTACATGGACTTATCAAGCAACAAACTCAATGGTAGCATACCTGTTGAAATCCTCAATCTACCAACTTTGAGCAATGTTTTGAACTTATCAAAGAATTTGTTGAGTGGATCAATACCTGAAGTTGGGAAATTGCCAACCATTGCAACTATTGACTTTTCCAACAACAGATTGTATGGAAACATTCCAAGCTCAATCAGCAGTTGTTTGAGCTTGGAGAAATTGCTTTTATCAAAGAATATACTTTCAGGTTCCATTCCAAAAGCTCTTGGAGATTTGAGAGGCTTGGAAACTTTGGACTTGTCCTCCAACCTACTCTCAGGATCCATTCCTATTGAACTTCAAAATTTGCTTGTCCTAAACCTTTTAAACCTCTCTTACAATGATTTAGAAGGAGCCATTCCTAGTGGTGGGGTTTTCCAAAATCTCTCTGATGTCCACTTAGAAGGCAATAAAAAACTATGCTTGCATGTTGCATGTGTGCCTCAATTCCATAGAAGAACACATATCAGATTTTATATCATCATAGCTGTTGTTTTAACATTGGGACTATGTCTCACAATTGGCTTGCTACTATATATGAAGTATACAATGGTTAAGGTAACAGCAACAACAGCGTCTGGACAGCTAAAGCCACAGGCTCTACTGATCTCTTATGACGAGCTTCGCTTGGCAACTGAGGAGTTCAGCCAAGAAAATTTAATAGGAGTTGGGAGTTTTGGATCAGTGTATAAAGGCTACCTAAGTCAGGGAAATACTGTTGCGGTGAAAGTGCTTGACACTCTAAGAACAGGTTCTTTGAAGAGTTTCTTTGCAGAGTGTGAGGCTATGAAGAATTCAAGGCACAGAAATTTGGTTAAGCTAATCACATCATGCTCTAGTGTTGACTTTAGAAACAATAGTTTTCTGGCTTTGGTGTATGAGTATTTAAGTAATGGGAGCTTGGAAGATTGGATTAAGGGGAGGAGAAATCATGCAAATGAAAATGGTTTGAACCTTATGGAGAGAGTGAATATAGCTATAGATGTTGCTTGTGCATTAGATTACCTGCACAATGATAGTGAAACTCCTATTGTGCACTGTGATTTAAAACCAAGCAACATTCTTCTGGATGAAGATATGACTGCAAAGATTGGAGATTTTGGTTTGGCTAGGTTGCTGATTCAAAGATCTACTAATCAAGTTTCCATCAGCTCCACTCATGTTCTAAGGGGTTCAATTGGTTACATACCTCCAGAGTATGGATGGGGAGAGAAACCTTCAGCAGCGGGAGATGTATATAGTTTTGGAATAGTGTTACTAGAGCTCTTCTCTGGGAAAACTCCACAGGATGATTGCTTTACAGGAGGCCTAAGCATAACAAAATGGGTGCAATCAGCATTCGAAAACAAGACTGTACAAGTCATTGACCCTCAGCTGCTATCTCTCATTTTTCATGATGATCCTGCTAGAGAAGACACCAATCTACTAATCCATTGTGTGAATGCAATTATGGGAGTAGGCATGTCTTGCACTTTAGATAATCCAGATGACCGCATTGGCATTAGAGTTGCTGTTCGCCAACTAAAAGCTGCCAGGGACTCTCTCATGAAAAAATCTGATATTAGGAGTCCTACTAAAAGCTACTATTTGATAAATAATGCAAAAGTTGAAATTTGA 3093 0.3812 MALFSHSHLHIFSLLMILIIHFDFNNLVVSSTTLSITTDKEALISLKSQLSNNDTSSSHPLSSWSHNSSPCNWTGVLCDKHNQRVTGLDLSGFGFSGNLSPCIGNLSSLQSLQLQDNQLTGIIPSQITNLYSLRVLNMSSNRFEGIMIPSNLTNLDELQILDLSSNKIVSRIPEDISSLKKLQVLKLGRNSFYGTIPQSLGNISSLKNISFGTNSLTGWIPSELGKLHNLIELDLTLNNLTGIVPPVIYNLSSLVNLALAANSFWGEIPYDVGHKLPKLLVFNFCFNKFTGRIPGSLHNLTNIRVIRMAYNRLEGTVPPGLGNLPFLHMYNIGHNKIVTSGVNSLDFITSLTNSTHLKFLAIDGNMLEGVIPETIGNLSKELSNLYMGGNRFNGSIPSSIGLLSGLKLLNLSHNSISGEIPKELGQLDELQELYLDGNKISGAIPNSLGNLIKLNKIDLSKNELVSRIPISFGNFQNLLYMDLSSNKLNGSIPVEILNLPTLSNVLNLSKNLLSGSIPEVGKLPTIATIDFSNNRLYGNIPSSISSCLSLEKLLLSKNILSGSIPKALGDLRGLETLDLSSNLLSGSIPIELQNLLVLNLLNLSYNDLEGAIPSGGVFQNLSDVHLEGNKKLCLHVACVPQFHRRTHIRFYIIIAVVLTLGLCLTIGLLLYMKYTMVKVTATTASGQLKPQALLISYDELRLATEEFSQENLIGVGSFGSVYKGYLSQGNTVAVKVLDTLRTGSLKSFFAECEAMKNSRHRNLVKLITSCSSVDFRNNSFLALVYEYLSNGSLEDWIKGRRNHANENGLNLMERVNIAIDVACALDYLHNDSETPIVHCDLKPSNILLDEDMTAKIGDFGLARLLIQRSTNQVSISSTHVLRGSIGYIPPEYGWGEKPSAAGDVYSFGIVLLELFSGKTPQDDCFTGGLSITKWVQSAFENKTVQVIDPQLLSLIFHDDPAREDTNLLIHCVNAIMGVGMSCTLDNPDDRIGIRVAVRQLKAARDSLMKKSDIRSPTKSYYLINNAKVEI* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0977 1030 CDD STKc_IRAK 713 990 - -
Tpr3g0977 1030 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 25 1007 - -
Tpr3g0977 1030 Gene3D Ribonuclease Inhibitor 36 321 IPR032675 -
Tpr3g0977 1030 PANTHER OS04G0122200 PROTEIN 25 1007 - -
Tpr3g0977 1030 SUPERFAMILY L domain-like 39 338 - -
Tpr3g0977 1030 SUPERFAMILY Protein kinase-like (PK-like) 689 1000 IPR011009 -
Tpr3g0977 1030 ProSitePatterns Protein kinases ATP-binding region signature. 713 735 IPR017441 GO:0005524
Tpr3g0977 1030 ProSiteProfiles Leucine-rich repeat profile. 573 596 IPR001611 GO:0005515
Tpr3g0977 1030 Pfam Leucine rich repeat N-terminal domain 38 79 IPR013210 -
Tpr3g0977 1030 SMART LRR_typ_2 571 594 IPR003591 -
Tpr3g0977 1030 SMART LRR_typ_2 595 620 IPR003591 -
Tpr3g0977 1030 SMART LRR_typ_2 227 250 IPR003591 -
Tpr3g0977 1030 SMART LRR_typ_2 403 426 IPR003591 -
Tpr3g0977 1030 SMART LRR_typ_2 475 499 IPR003591 -
Tpr3g0977 1030 SMART LRR_typ_2 427 451 IPR003591 -
Tpr3g0977 1030 SMART LRR_typ_2 155 179 IPR003591 -
Tpr3g0977 1030 SMART LRR_typ_2 300 324 IPR003591 -
Tpr3g0977 1030 SMART LRR_typ_2 130 151 IPR003591 -
Tpr3g0977 1030 SMART LRR_typ_2 106 129 IPR003591 -
Tpr3g0977 1030 Gene3D Transferase(Phosphotransferase) domain 1 788 1024 - -
Tpr3g0977 1030 SUPERFAMILY RNI-like 256 615 - -
Tpr3g0977 1030 Pfam Leucine rich repeat 108 168 IPR001611 GO:0005515
Tpr3g0977 1030 Pfam Leucine rich repeat 381 440 IPR001611 GO:0005515
Tpr3g0977 1030 SMART LRR_sd22_2 155 178 - -
Tpr3g0977 1030 SMART LRR_sd22_2 227 253 - -
Tpr3g0977 1030 SMART LRR_sd22_2 106 132 - -
Tpr3g0977 1030 SMART LRR_sd22_2 571 592 - -
Tpr3g0977 1030 SMART LRR_sd22_2 427 453 - -
Tpr3g0977 1030 ProSiteProfiles Protein kinase domain profile. 707 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0977 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Tpr3g0977 1030 ProSiteProfiles Leucine-rich repeat profile. 157 179 IPR001611 GO:0005515
Tpr3g0977 1030 Gene3D Phosphorylase Kinase; domain 1 671 787 - -
Tpr3g0977 1030 Pfam Protein kinase domain 708 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0977 1030 Gene3D Ribonuclease Inhibitor 338 640 IPR032675 -
Tpr3g0977 1030 SMART serkin_6 707 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0977 Tpr-Chr3 8932682 8936650 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0977 38 1011 Receptor kinase-like Gene Family AT3G47570 40.763 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr3g0977 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0977 - - gmx:100783512 1505.73