Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0966 ATGGCTCACAACAACATGCGCCACCTTCATCATCCTAATCAATTTGATATTCAGCAAATTTTATCAGAGGCACAATATAGATGGCTACGTCCACCTGAAATTTGCCAAATTCTCACTAATCATAACAACTTTCAGATTGCTTCTGAACCTTCATATATGCCTACAAGTGGTTCACTTTTCCTATTTGATCGGAAGGTGACGCGATACTTTAGAAAGGATGGTCATAATTGGAGGAAGAAAAAAGACGGAAAAACTGTCAGGGAAGCTCATGAAAGACTCAAGGTTGGAAGTGTGGATGTATTGCACTGCTACTATGCTCATGGAGAACAAAATGATAATTTTCAAAGACGAACTTACTGGATGCTCGAGGAGGACCTCTCACACATTGTTCTAGTCCATTATCGCGAAGTGAAGGGAGCCAAGGCAACTTTAATATGCACCAAAGAAAATGAAGAATCTCATCCTCATGCTCAACAAACATACAAAGTTATGTCCAACACAGAGATGGAGACTTCTTTACCGTCTAGCACGAACACTGCACAATCATCAGAATATGATGAAACTGAATCAGCATTCAATAGCCATGCAAATTCAGATTTCTACTCTTTTCTTGAGCTGCAACACCCTGTTGTTCAGAAGATTAAAGCTCAAATAGCTGATTCTAACTGCCCTCTACCATTAAAAGATGATCAACAAAGGTTACCTGTCATTCCTAAGGTGGATTATATCTCACTCAGTCAACCTAATGAAACCAAATGCATTAATAATATTGGACTGACATGTGAGCTCTCAAAAATCCTTGGCTTCTCATCATGCCAAGATATCTTAGAAAATCATTCTGGAAGTCATAATGTGCCTTTTCAGCCTTCTTTTCCTGAAACACAATCCAATAACATGGGAATCAATGGTACTTCTCAAGGATATGAGCCTTCCGGTTTTATTTCTTTAAGCACGTCAACTTGGCCCAATGATAGTGCGTATTCAGTCTCGACGTGTGAGGTTAGTTATAACGACAATGAGAAGGAAGTTAATGAAGTTGATTTTCAACAAACCTTGGAACAATTCCTTATTCATCCACACCAACAACACAAGGTTCTTATGTGGAATAGCCCTCACGAAAAACTTTTAGAAGCAGAAGAGTTAAAATCGGATCTAGAGGTTGGTAGAAGCCTAGATGAAATACAAGCCACTCATTTTACTTCAAAGAAGACTCTATTAGATGTATCTCTGGCAGATGAGGGCCTGAAGAAGCTCGACAGTTTCAATAGATGGATGAGTAATGAACTAGGAGACGTGGAAGAATCGAGCAAAAAATCCACTTCAAGTGCTTATTGGGATACAGTTGAAAGTGAAAATGGTGTTGATAGTAGAACTATTCCTTCCCTAGTGCACCTGGAAAACTATGTACTAGATCCATCTATTTGCTATGATCAGCTCTTCAGCATCATCGATTATTCCCCATGCTGGACATTTGAGGACTCGGAAATTAAGGTTCTCATTTCAGGGCGATTCTTAAAGGGTCAAAATGAAGCAGAAGATTGTAAATGGTCATGCATGTTTGGCGAGGTAGAAGTGCCAGCAGAGATAATCGGGAATGGTGTTCTCTGTTGTCATACTCCTCCGCACAAGGCTGGCAGGGTTCCTTTTTATGTAACATGTTCTAATAGGTTAGCATGTAGTGAAGTGCGTGAATTTGATTTCCGAGCTAATTATACTCAAGAAGTCAACACTGGAGGCGAAAGCAGTAGCAGCAACACTTTCGATACTTTTAATAGACGGTTTGGTGAACTGTTGTCTCTGGAGCATGACTTCCCTCAGAGTTTAGATTCAGTTAGTGTGAATGAGAAATCTCAACTGAGAAGTAAAATCAGTTCATTGTTTAGGAGGGAGGATGATGAATGGGACAAACTACTGAAATTTACTCTAGAGAAAGAATTTCCTCTGGAGCTTGTACAAGAACAGCTGCATGAAAATCTTCTAAAAGATAAGTTGCACGCATGGCTCCTTCAGAAAACAACTGAAGATGGTAAAGGTCCAAATGTATTATATGAAGATGGGCAAGGTGTGCTTCATTTAGCAGCTGCTCTTGGCTACGATTGGGCCTTAGAACCAACAATAGTTGCTGGTGTGAATGTGAATTTTCGCGATGTAAATGGATGGACTGCTCTTCATTGGGCAGCATTTTGTGGCAGAGAGCGCACAGTTGTTTCTCTCATAGCTCTTGGAGCAGCACCAGGAGCACTTACTGATCCTTGCCCACAACATCCTTCCGGTAGAACACCAGCTGACCTAGCTTCTGCAAATGGACACAAAGGAATTGCAGGTTATCTTGCAGAATCTTTCCTAAGTGCACAACTCGAGTCTATTGATTTGAAAAGAGGTGCGGCAGAAAGTTTTGGAACAAAAGTAGTACAAAGAGTTCAAGAACAAAACACTGCGCGACTTAACAATGAGGGAATCTCACATGAACTGTCACTGAAAGATTCATTGGCTGCAGTGTGCAATGCAACTCAAGCTGCTGCTCGTATTCATCAAGTTTTTAGAGTGCAATCATTCCAGAGAAAACAACAAAAGGAATATGGTGATGACAAATTTGGAATATCTGATGAACGTGCTCTTTCACTAATAGCACTGAATGCGAAGTCGCACAAGTCTGGACAACGTGATGAGCCTGTTCATGTTGCTGCAACGCGAATTCAGAACAAGTTCCGCAGTTGGAAAGGCAGAAAAGATTTTTTGATTATTCGACAGCGAATTGTAAAAATACAGGCTCATGTGAGAGGTCACCAGGTTAGGAAAAACTATGGGAAGATGAAGATAATTTGGTCGGTTGGGATCGTGGAAAAGGTTATATTACGTTGGCGTCGAAAAGGTAGTGGTTTGCGCGGGTTTAAATCGGAGGCTGCGGCGGAAGGTGTATCATCTTCCACTGAGGATGACTATGATTTTTTGAAAGAAGGCAGGAAGCAAACTGAGAAAAGGTTGGAGAAAGCCCTTGCTAGGGTGAAGTCAATGGCACAATATCCAGATGCAAGAGACCAATATCACAGGCTATTGAATGTTGTAACTGAGATACGAGAAAATCAGGTAAAGCAAGATTGGAGTTTTTGCAATTCAGAAGAAACAAGACAATTCCGCAGCCTCATTGATCTTGAAGCGTTGTTAGATGAAGATACTTTCATGCATACAGCTATTTAG 3198 0.4074 MAHNNMRHLHHPNQFDIQQILSEAQYRWLRPPEICQILTNHNNFQIASEPSYMPTSGSLFLFDRKVTRYFRKDGHNWRKKKDGKTVREAHERLKVGSVDVLHCYYAHGEQNDNFQRRTYWMLEEDLSHIVLVHYREVKGAKATLICTKENEESHPHAQQTYKVMSNTEMETSLPSSTNTAQSSEYDETESAFNSHANSDFYSFLELQHPVVQKIKAQIADSNCPLPLKDDQQRLPVIPKVDYISLSQPNETKCINNIGLTCELSKILGFSSCQDILENHSGSHNVPFQPSFPETQSNNMGINGTSQGYEPSGFISLSTSTWPNDSAYSVSTCEVSYNDNEKEVNEVDFQQTLEQFLIHPHQQHKVLMWNSPHEKLLEAEELKSDLEVGRSLDEIQATHFTSKKTLLDVSLADEGLKKLDSFNRWMSNELGDVEESSKKSTSSAYWDTVESENGVDSRTIPSLVHLENYVLDPSICYDQLFSIIDYSPCWTFEDSEIKVLISGRFLKGQNEAEDCKWSCMFGEVEVPAEIIGNGVLCCHTPPHKAGRVPFYVTCSNRLACSEVREFDFRANYTQEVNTGGESSSSNTFDTFNRRFGELLSLEHDFPQSLDSVSVNEKSQLRSKISSLFRREDDEWDKLLKFTLEKEFPLELVQEQLHENLLKDKLHAWLLQKTTEDGKGPNVLYEDGQGVLHLAAALGYDWALEPTIVAGVNVNFRDVNGWTALHWAAFCGRERTVVSLIALGAAPGALTDPCPQHPSGRTPADLASANGHKGIAGYLAESFLSAQLESIDLKRGAAESFGTKVVQRVQEQNTARLNNEGISHELSLKDSLAAVCNATQAAARIHQVFRVQSFQRKQQKEYGDDKFGISDERALSLIALNAKSHKSGQRDEPVHVAATRIQNKFRSWKGRKDFLIIRQRIVKIQAHVRGHQVRKNYGKMKIIWSVGIVEKVILRWRRKGSGLRGFKSEAAAEGVSSSTEDDYDFLKEGRKQTEKRLEKALARVKSMAQYPDARDQYHRLLNVVTEIRENQVKQDWSFCNSEETRQFRSLIDLEALLDEDTFMHTAI* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0966 1065 SUPERFAMILY E set domains 482 567 IPR014756 -
Tpr3g0966 1065 SMART CG_1_2 20 138 IPR005559 GO:0003677
Tpr3g0966 1065 Gene3D - 891 940 - -
Tpr3g0966 1065 Gene3D Immunoglobulins 475 571 IPR013783 -
Tpr3g0966 1065 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 11 1029 - -
Tpr3g0966 1065 ProSiteProfiles IQ motif profile. 893 921 IPR000048 GO:0005515
Tpr3g0966 1065 Pfam CG-1 domain 23 136 IPR005559 GO:0003677
Tpr3g0966 1065 ProSiteProfiles IQ motif profile. 915 939 IPR000048 GO:0005515
Tpr3g0966 1065 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 885 941 IPR027417 -
Tpr3g0966 1065 SMART iq_5 914 936 IPR000048 GO:0005515
Tpr3g0966 1065 SMART iq_5 891 913 IPR000048 GO:0005515
Tpr3g0966 1065 SUPERFAMILY Ankyrin repeat 664 779 IPR036770 -
Tpr3g0966 1065 ProSiteProfiles CG-1 DNA-binding domain profile. 17 143 IPR005559 GO:0003677
Tpr3g0966 1065 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 11 1029 - -
Tpr3g0966 1065 ProSiteProfiles Ankyrin repeat profile. 718 750 IPR002110 GO:0005515
Tpr3g0966 1065 Gene3D - 649 790 IPR036770 -
Tpr3g0966 1065 SMART ANK_2a 718 747 IPR002110 GO:0005515
Tpr3g0966 1065 SMART ANK_2a 757 786 IPR002110 GO:0005515
Tpr3g0966 1065 Coils Coil 981 1001 - -
Tpr3g0966 1065 MobiDBLite consensus disorder prediction 167 189 - -
Tpr3g0966 1065 Pfam IQ calmodulin-binding motif 917 935 IPR000048 GO:0005515
Tpr3g0966 1065 Pfam Ankyrin repeats (3 copies) 690 780 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0966 Tpr-Chr3 8862413 8872442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0966 61 290 CAMTA Transcription Factor Family AT2G22300 43.083 6.02e-48 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Tpr3g0966 CG-1 1.7e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0966 K21596 - gmx:100798875 1522.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0966 3 8862413 8872442 Tpr2g2597 2 30809059 30818747 PCT