Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0956 ATGAAACCAGAAACAGTGACATTGGTGCTGGTGAATCTAGCTGGTATTATGGAAAGAGCAGATGAATCATTGCTACCAGGAGTATACAAAGAGATTGGTGCTGCTCTTAACGCTGACCCTACCGCGTTAGGTTCTCTCACTCTTTACCGATCCCTTGTTCAAGCATTCTGTTATCCTCTCGCTGCTTACCTCGCCTCGCGTCACAATCGTGCACATGTTATTGCTCTCGGTGCTTTCCTGTGGGCTGCTGCTACATTCTTTGTTGCTATCTCATCCACCTTCTTACAGGTGGCGATTTCAAGAGGTTTAAATGGCATAGGACTAGCCATTGTTATTCCAGCAATTCAGTCTCTAATTGCAGACTCTACAATTGATAGCAACCGTGGCGTGGCATTTGGATGGCTTCACCTAACAGGAAACATTGGAAGCATAATTGGTAATCTTTTTGCAGTACTACTAGCTTCAACATCAATCTTTGGTATACCTGGTTGGAGAATAGCTTTTCACATTGTTGCATTGGTTAGTGTCATAGTTGGCATATTAGTACGCATCTTTGCTAATGATCCGCACTTTCCAAAAAACGACGACAAAATAACTACATCACATCAGCCACCAAACAAGTCCTTTTATTCTGAGATGAAAGATTTAATAAAAGAAGCAAAAACAGTCATAAAAATTCCATCATTTCAAATTATTGTAGCTCAAGGAGTATTTGGATCATTCCGAGGGTCAAGTTTGTCATTTTTCACTCTTTGGTTAGAACTAATAGGCTTCTCACATGGAACAACAGCGATCATTTGGACCATATTTATAATTTCTAATTCGTTTGGTGGTCTATTTGGAGGATGGCTCGGAGATTTTTTATCTCAACGGTTACCAAACACCGGAAGATTAATGTTGGCACAAATAAGCGCAGGTTCAACGATTCCTTTAGCTGCAATTTTGCTGTTATTGTTGCCTAATGATCCATCCACGCCGTTAATTCATGGTTTGGTTTTAGTCATCATTGGATTAATCACATTCTGGTGTGCACCAGCAACTAATGATCCAATATTTGCAGAAATAGTCCCTGAGAAATCACGTACTGCAATATACGCTTTGGATCGATCTTTTGAAAGTTTATTGGCGTCCTTTGCTCCGCCTATTGTTGGAGTTTTGGCTCAGCATGTTTATGGTTATAAACCGGTGCCAAAAGGTTCATCCAATTCTATTGAAGTTGAAACTGATAGGGAAAATGCTGCATCACTCGCTAAGGCACTTTATAGTACAATTGCAATTCCAATTGCAATATGTGTTTTCATTTATTCATTTCTTTATTTTACATACCCAAGGGACAGAGAGCGAGCAAGAATGGTCGCGTTAGTTGAATCAGAAATGGAACAACTGAAGGAGGAACATTACACAGGAGAAGAGGAATATGGTGAATCTCATATTTTTTATGATAGTGATGAGAAAGTTTTGCTGTCCAAATAA 1473 0.3958 MKPETVTLVLVNLAGIMERADESLLPGVYKEIGAALNADPTALGSLTLYRSLVQAFCYPLAAYLASRHNRAHVIALGAFLWAAATFFVAISSTFLQVAISRGLNGIGLAIVIPAIQSLIADSTIDSNRGVAFGWLHLTGNIGSIIGNLFAVLLASTSIFGIPGWRIAFHIVALVSVIVGILVRIFANDPHFPKNDDKITTSHQPPNKSFYSEMKDLIKEAKTVIKIPSFQIIVAQGVFGSFRGSSLSFFTLWLELIGFSHGTTAIIWTIFIISNSFGGLFGGWLGDFLSQRLPNTGRLMLAQISAGSTIPLAAILLLLLPNDPSTPLIHGLVLVIIGLITFWCAPATNDPIFAEIVPEKSRTAIYALDRSFESLLASFAPPIVGVLAQHVYGYKPVPKGSSNSIEVETDRENAASLAKALYSTIAIPIAICVFIYSFLYFTYPRDRERARMVALVESEMEQLKEEHYTGEEEYGESHIFYDSDEKVLLSK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0956 490 PANTHER SPINSTER 4 457 IPR044770 -
Tpr3g0956 490 CDD MFS_spinster_like 8 435 IPR044770 -
Tpr3g0956 490 PANTHER TETRACYCLINE RESISTANCE PROTEIN, CLASS B-LIKE 4 457 - -
Tpr3g0956 490 SUPERFAMILY MFS general substrate transporter 6 448 IPR036259 -
Tpr3g0956 490 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 446 IPR020846 GO:0022857
Tpr3g0956 490 Pfam Major Facilitator Superfamily 13 380 IPR011701 GO:0022857|GO:0055085
Tpr3g0956 490 Gene3D MFS general substrate transporter like domains 4 399 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0956 Tpr-Chr3 8810431 8813119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0956 82 478 Inorganic Solute Cotransporters AT1G12940 22.222 9.28e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0956 - - mtr:MTR_8g090270 821.231