Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0951 ATGTCTCATCCAAAGCATGACGTGTTCCTCAGCTTTAGAGGAGAGGACACTCGTGACAACTTCACGAGTCATCTTCATGCAGAATTGTGTAGGAAAAAGATTGAGACGTTCATAGATAATAGACTTGTTAGAGGCGAAGAGATTTCACCAGCACTATACAGAGCAATAGAAGAATCGGCAATTTATGTCATCATTTTGTCAGAACACTATGCTTCTTCCAGTTGGTGCTTAGATGAACTGACAGAGATACTGAAATGTAAGGAGAGATATGGAAGGGAAGTCATACCAGTGTTCTATAAGGTGGATCCGTCAAATGTTAGGCATCAGAGACAGAGTTATGCAGATGATTTCGTTAAGCATCATCAACGATTTGGTGGCAAAGTGGACGCGTGGAAGGCTGCTCTAACCCAAGTAGCTGGACTCTCTGGCTGGGATTCACAAGTTACCAGACCAGAAAGCACACTTGTTACAGAGATTGTGAAAGACATTTTGAAAAAATTGAATAGTTGTTTCTCAAGCAATTATGAAGGAATGACGGGAATTGACATGCATATTGAACAAATCCAATCCTTGTTGCTCCTTGAGTTGCCGACTGTTCGTATCATAGGAATATGGGGCATGGGAGGGATAGGCAAAACAACAATTGTCAGTGCGGTCTTTGAAAAACTCGCAACTCAGTTCAGTTCAAAAAGCATAATTCTAAATGTTCAACAAGAAATAAAAAGAGTTGGACTAGACAATGTAAAAAGCAAATACTTATCAAAACTTCTAGGGGAAGACATTACATCCTCTGAAAACAACTATTCATTTGATCCAAGGCTCAAACGGACAAAGGTTCTTCTTGTTTTTGATGATGTGAAAGATTCTGATCAACTTAAAGATTTAATTGGAACACATAGTAACTTTGGCCAAGGGAGTAGAATCATTGTGACTAGTAGAGACAAGCAAGTGCTTGAGAATGCCAATGCTGATGAAATATATCAAGTTAGGGAAATGGATTATCACGATTCTCTACAACTCTTCTGTTTATTTGCCTTTAAACAAAAGAATCCAAAAGAATCTTTTGTGAGCTTAACGGAAAAGGTTTTAGATTATGCTAAAGGGCTTCCATTAGCTCTCAAAGTTCTGGGCTCATTGCTTTATGGCAAAGCAAATGAAGTATGGGAAAGTCAGCTACAAAAGCTCGAAAAGATTCCCGATCTTAAAATTTTTAGATTGTTGAAGTTAAGTTATGATGGACTTGACGACGAACAAAAGGACATATTTCTTGACATAGCTTGCTTCCATAGAGGAGAAGATGAGAAAGATGTAGCAATAACATTGGATTCTTGTGGTTTCTCTGCTAACATTGGAATGGATGTTCTCAAAGATAGATGCCTTATATCTATTTCACACGGTAGTGTATGGATGCATGATCTAATACAAGAAATGGGGCATGAAATTGTTAGGCTTCAATGTGTCGATGATCCTGGAAAACGTAGTCGATTATGGAAGGCTAGTGATTTTTACGATGTTTTAAGCAAGAACATGGGAAAGGCTACAGATGCAATCCGGTGTATATTCCTAAACATGGATGAAATAGAGAAAGTTCAACTAGATGCTGATACATTTAAGAAAATGCATCATCTTAGAATTATCAACTTCTACAATTGCTTTGGGAATTACTCAAACGTGACCTTTCATGGGCTTCTTAAGAGTTTTCCTAATGATTTAAAATTTCTTCATTGGGATTGGTTCCCTCAAAGATCTTTGCCGAAAGACTTTTGCCTAAAAAATCTTTCCACACTTGAAATGCCTCGTAGCGATCTTGAACAACTTTGGGAGGGGAATCAGGCTTTACCAAATTTGAAAAGGCTTAACCTTAGTTATTCTAAGAAGCTGACAAGACTACCAGACCTCTCTTCGTGTTCAAATATTGAAGAAGTATGTCTTTCTGGCTGTATAAGTTTGACACAGGTTTACTCCTCTACTTTCCTCAACAACCTTTACATTTTATCTATAGAAGATTGTACTGAACTCAAGAGTATAGATATTCCTAGCAATATTCTATCAAGACCATCTGGATTAGTGACTCTCACTGATTGTCACAACCTTGAAACACTTTTAATCAGCAGTAGAACTGATCACGTGGTTCAATTTACTCATTCTTATAGATATTATAAGTTTGAAAGAATGAAATCTTGTTGTGAAGAAACAGAAATAGCGATGAATGACGAAGGGGATTACGAGATTCGGGAATCATTTTCAGATACTGTAACTAGTATCAATGATTTTTATTGGTTTGATATTTCCAAATGTGAGTCCCTAACATGCCTACCAGCTGAACTTTTAAATTTGAAGTTTCTAAGAACACTTTCTCTCAGTGGTTGTTTAAAGTTGGAGGAGTTACCTGAAATCAAGGAGACTATGGAAAATCTAAAAGTGCTCGTCTTAGACCATACATCAATAAAAGAACTACCTTCATCCTTACATCGTTTGGTCGGGCTTGAAGAATTGAGCTTGCAAAGTTGCAAAAAGCTTAAGACTATTCCATCTTCTATTGGAAATTTCAGTAAACTTCTCAAGTTAAACCTTGCCAATTGTGCATCACTTGAAACTTTTCCAAGTAGCATTTTCAAATTGAAGTTGACAGAACTCGATTTCAATGGTTGCTCAATGCTTAGGACCTTTCCGGAGATCTTGGAGCCTGCAGAAAGTTTTACTTGCATTAACTTAAGAAAAACAGCAATAAAAGAACTACCTTCATCTCTAGACCAATTGGTCGGGCTTGAAGAACTGATCTTGCAAAGTTGCAGAAAGCTTAAGAATATTCCATCTTCTATTGGAAATCTCAGTAAACTTCTCAAGTTAAACCTTGCCAATTGTGCATCACTTGAAACTTTTCCAAGCAGCATTTTCATATTGAAGTTGACAGAACTCGATTTCAATGGTTGCTCAATTCTTAGGACCTTTCCTGAAATACCAAATGACAGTGTCTGCTTGTCATCCTTGACTGAACTTTCACTGCAAGGAAGCAGAATTGTGAACCTTCATGAAAGTGTAGCTCATCTGTCAAGTTTGAGATCACTTAATTTAAGTGATTGCGAATTGCTTGAATGTGTTCCAAAGCTTCCACCAAATCTAAACCAAGTTTTGGCATTTGATTGCCCTTCCGTTAAGAGAATGATGCTAAATTCAAGGTCTGATTTCCAAAAAAGTACCTTCAAATTTAATCTGACCAATAGTGAAGAACTAGATGGTACTTCTTTGAGTAAAATTGAAGAGGAAGCATATATTAAGATCAAAGATGATGCATATAGGTCAGTGTTGTTCTGTTTTCCAGGAAGTGCAATTCCTTATTGGTTCCGTCACCGTTGCCAGGGACATTCAATAACTATAAGAAGTGATGATTTATATTTGTATGGGGGAAACAAGCTTATTGGTTTTGCTCTGTGTGTGGTTTTGGGACGTGACTTTCCATTTGATCTCAGCAGCAGCATAGCACCTTGGTATAATTGTATTGGCTTTACATACCAATTAAAATTTGAACCTGATCATGGTCAAATACACTTTCATCCCAACAAGTTTGAAGGTAAATATGATTGGATGCCAATGAGAAGATTTTCCCAACATCACACATTCTTATGGAAGTATGAATTGGACTTGGCAACAATTGGCTACGGGCTCATTGATGCAGACACTATCACTTTTGAGATCCTAGATGAGCATCGTTGTCCCTTAAGTTTTCCAACAACCATGACGGTGATAGAATGTGGAATATGTCCTCTGTATGCCAAAGAAAATAATGATGATAGCATTGAAGAACCAAGTGGAAGTGGGGATGCTGTGTGTTTGGTGGATTTGGATCTCTCCTTAGGCGGTAATTACACACATAATAAAAGAAGAAAAACTTAG 3894 0.3734 MSHPKHDVFLSFRGEDTRDNFTSHLHAELCRKKIETFIDNRLVRGEEISPALYRAIEESAIYVIILSEHYASSSWCLDELTEILKCKERYGREVIPVFYKVDPSNVRHQRQSYADDFVKHHQRFGGKVDAWKAALTQVAGLSGWDSQVTRPESTLVTEIVKDILKKLNSCFSSNYEGMTGIDMHIEQIQSLLLLELPTVRIIGIWGMGGIGKTTIVSAVFEKLATQFSSKSIILNVQQEIKRVGLDNVKSKYLSKLLGEDITSSENNYSFDPRLKRTKVLLVFDDVKDSDQLKDLIGTHSNFGQGSRIIVTSRDKQVLENANADEIYQVREMDYHDSLQLFCLFAFKQKNPKESFVSLTEKVLDYAKGLPLALKVLGSLLYGKANEVWESQLQKLEKIPDLKIFRLLKLSYDGLDDEQKDIFLDIACFHRGEDEKDVAITLDSCGFSANIGMDVLKDRCLISISHGSVWMHDLIQEMGHEIVRLQCVDDPGKRSRLWKASDFYDVLSKNMGKATDAIRCIFLNMDEIEKVQLDADTFKKMHHLRIINFYNCFGNYSNVTFHGLLKSFPNDLKFLHWDWFPQRSLPKDFCLKNLSTLEMPRSDLEQLWEGNQALPNLKRLNLSYSKKLTRLPDLSSCSNIEEVCLSGCISLTQVYSSTFLNNLYILSIEDCTELKSIDIPSNILSRPSGLVTLTDCHNLETLLISSRTDHVVQFTHSYRYYKFERMKSCCEETEIAMNDEGDYEIRESFSDTVTSINDFYWFDISKCESLTCLPAELLNLKFLRTLSLSGCLKLEELPEIKETMENLKVLVLDHTSIKELPSSLHRLVGLEELSLQSCKKLKTIPSSIGNFSKLLKLNLANCASLETFPSSIFKLKLTELDFNGCSMLRTFPEILEPAESFTCINLRKTAIKELPSSLDQLVGLEELILQSCRKLKNIPSSIGNLSKLLKLNLANCASLETFPSSIFILKLTELDFNGCSILRTFPEIPNDSVCLSSLTELSLQGSRIVNLHESVAHLSSLRSLNLSDCELLECVPKLPPNLNQVLAFDCPSVKRMMLNSRSDFQKSTFKFNLTNSEELDGTSLSKIEEEAYIKIKDDAYRSVLFCFPGSAIPYWFRHRCQGHSITIRSDDLYLYGGNKLIGFALCVVLGRDFPFDLSSSIAPWYNCIGFTYQLKFEPDHGQIHFHPNKFEGKYDWMPMRRFSQHHTFLWKYELDLATIGYGLIDADTITFEILDEHRCPLSFPTTMTVIECGICPLYAKENNDDSIEEPSGSGDAVCLVDLDLSLGGNYTHNKRRKT* 1298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0951 1297 SMART till_3 5 141 IPR000157 GO:0007165
Tpr3g0951 1297 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 923 1038 - -
Tpr3g0951 1297 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 4 705 - -
Tpr3g0951 1297 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 824 935 - -
Tpr3g0951 1297 Gene3D - 2 168 IPR035897 -
Tpr3g0951 1297 Gene3D Ribonuclease Inhibitor 893 1089 IPR032675 -
Tpr3g0951 1297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 425 IPR027417 -
Tpr3g0951 1297 Gene3D - 169 329 IPR027417 -
Tpr3g0951 1297 Gene3D - 331 415 IPR042197 -
Tpr3g0951 1297 SUPERFAMILY "Winged helix" DNA-binding domain 402 506 IPR036390 -
Tpr3g0951 1297 Pfam TIR domain 5 179 IPR000157 GO:0007165
Tpr3g0951 1297 ProSiteProfiles TIR domain profile. 4 167 IPR000157 GO:0007165
Tpr3g0951 1297 Pfam C-JID domain 1106 1260 IPR045344 -
Tpr3g0951 1297 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 144 IPR035897 -
Tpr3g0951 1297 Gene3D Ribonuclease Inhibitor 741 892 IPR032675 -
Tpr3g0951 1297 SUPERFAMILY L domain-like 757 1052 - -
Tpr3g0951 1297 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 705 IPR044974 GO:0006952
Tpr3g0951 1297 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 824 935 IPR044974 GO:0006952
Tpr3g0951 1297 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 923 1038 IPR044974 GO:0006952
Tpr3g0951 1297 Gene3D Ribonuclease Inhibitor 512 729 IPR032675 -
Tpr3g0951 1297 PRINTS Disease resistance protein signature 201 216 - -
Tpr3g0951 1297 PRINTS Disease resistance protein signature 273 287 - -
Tpr3g0951 1297 PRINTS Disease resistance protein signature 366 380 - -
Tpr3g0951 1297 PRINTS Disease resistance protein signature 1015 1031 - -
Tpr3g0951 1297 SMART LRR_typ_2 613 637 IPR003591 -
Tpr3g0951 1297 SMART LRR_typ_2 920 944 IPR003591 -
Tpr3g0951 1297 SMART LRR_typ_2 1017 1044 IPR003591 -
Tpr3g0951 1297 SMART LRR_typ_2 803 826 IPR003591 -
Tpr3g0951 1297 SMART LRR_typ_2 994 1016 IPR003591 -
Tpr3g0951 1297 Pfam NB-ARC domain 183 397 IPR002182 GO:0043531
Tpr3g0951 1297 SUPERFAMILY L domain-like 535 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0951 Tpr-Chr3 8780583 8794125 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0951 760 933 WRKY Transcription Factor Family AT4G12020 35.057 3.49e-19 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0951 - - ccaj:109803335 1225.31