Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0950 ATGTCTGATCCAACAACTCCAAAGTACGATGTGTTCCTGAGCTTTAGAGGAGAGGATACCCGTGATAATTTCACGAGTCATCTTTATGCAGAATTGTGTAGGAAAAAAATTGAGACATTCATAGATAATAGACTTGGCAGAGGCGAAGATATTTCACCAGCCTTGTACGAAGCAATTGAAGAATCAACAATTTATGTCATCATTTTATCAGAACACTATGCTTCTTCAAGTTGGTGCTTAGATGAACTGACAGAGATACTGAAATGTAAGGAGAGATACGGAAGGGAGGTGATACCTGTGTTCTATAAGGTGGATCCATCAAATGTTAGGCATCAGAGACAGAGTTATGCAGATGATTTCGTTAAGCATCATCAACGATTTGGTGGCAAAGTGGATGCGTGGAAGGCTGCTCTAACCCAAGTAGCTGGACTCTCAGGCTGGGATTCACAAGTAACCAGACCTGAAAGCACACTTGTTACAGAGATTGTGAAAGACATTGTGAAAAAATTGAATCGTTGTGTCTCAAATGATTATGAAGGAATGACAGGAATTGACAACCATATTGAAAAAATTCAATCCTTGTTGCTCCTTGAGTTGCCGACTGTTCGTATCATAGGAATATGGGGAATGGGAGGGATAGGGAAAACAACAATTGCCAGTGCAGTCTTTGAAAAACTCGCAACTCAGTTCAATTACAAAATCATCATTCTAAATGTTCAACAAGAAATAGAAAGAGTTGGAGTAGACCATGTAAAAAGCAAATACTTAACAAAACTTCTAGGGGAAGACATTTCATCCTCTGAATACAACTTTTCATTTGATCCAAGGCTGAAACGGATGAAGGTTCTTCTTGTTTTTGATGATGTGAAAGATTCTGATCAACTTAAAGATTTAATTGGAACACATAGTAACTTTGGTCAGGGGAGTAGAATCATTTTGACTAGTAGAGACAAGCAAGTGCTGATGAATGCCAATGTTGATGAAATATATCAAGTTAGGCAAATGAATTCTCAAGATTCTCTACAAGTTTTCTATTCATTTGCCTTTAAACAAAACCGTCCATTAGAAGAAACTTATGTGAGCTTATCAAAACAAGTATTAGACTATGCTAAAGGGGTTCCATTAGCTCTCAAAGTGTTGGGCTCATTGCTTTATGGCAGAACAAAGGAAGCATGGGAAAGTGAGCTGCAAAAGCTCAAAAAGCTTCCCGATCATAAAATTTTCAGCTTGTTGAAGTTAAGTTATGATGGTCTTGACAGCGAACAAAAGAATATATTTCTTGACATAGCATGCTTCTACAGAGGAGAACGGGGGAAATTTGTAGAAAATGCATTGGATCGTTGTGGTTTCTCTGCTCGCATTGGAATGGATGTTCTTGAAGATAGGTGTCTTATATCTATTTCAAAATATGGTGAAGTTTGGATGCATGATTTAATACAAGAAATGGGGCATGCAATTGTTCAACTTGAAAATAAAGATCCTGGAAAACGTAGTCGATTATGGAAGTCCGACGATATTTATGATGTTTTGAAAAAGAACAAGGGAAAGGGAACAGATGCAATCCAGTGTATATTCCTAGACATGACGAAAATAAAGGAGGATATTCAACTACATGCTGATACATTCAAGAAAATGCATAATCTTAGAATGATCAACTTCTATAATCGTTATGCATTTTTTTGTTACCCAATTGTGATCCTATATTGTTCATTTCTTAAGAGTCTTCCAGATGAATTAAAATTTCTTCATTGGGATTGCTTCCCTCAAAGATCTTTGCCGCTAGAATTTTGCCCAAGAAATCTTGTTACACTTGAAATGTCTAGTAGCGATCTTGAACAACTTTGGGAGGGGGATCAGGCTTTACCAAATTTGAAAAGGCTTAACCTTAGTTATTCTCAGAAGCTGATAGCAGTTCCAGACCACTCTTTCTCTCCAAATATTGAAGAAGTAATTCTTAGTGAATGCATAAGTTTGACACAAGTTTACTCCTCTAGCTTCCTCAACAACCTTTACATTTTATCTGTAGCAGGTTGTACTGAACTCAAGAGTATAGATATTCCTAGCAATATTCTATCAAGACCATCTGGATTAGTGTCTCTCAGTAATTGTTACAACCTTGAAACACTTTTAATCAGCAGTAGAACTACTGATCATGTTGTTCAATTTACTCATTCTTATAGCTATTATAAGTTTGAAAGAATGAAATCTTGTTTTGAAGAAACAGAAATACAGATGAATGACGAAGGGGATTACGAGATTTGGGAATCATTTTCAGATCCTGTTGTAACTAGTATCAATGATTTTTATTGGTTAGATATTTCCAATTGCGAGTCCCTAACATGCCTACCAGCAGAACTGTTAAATTTGAAGTTTCTAAAAACACTTGATCTTAGTGGTTGTTTAAAGTTGGAGGAGTTACCTGAAATCAAGGAGACTATGGAAAATCTAAAAGCGCTCATCTTAGACGAAACAGCAATAAAAGAACTACCTTCATCCTTGTACCGTTTGGTCGGTCTTGAAGAATTGAGCTTAAAAAAGTGTAGAAGGCTTAAGACTATTCCATCTTTCATTGGAAATCTCAGCAAACTCCTCGAGTTAAACCTTGCCTATTGTGAATCTCTTGAAACTTTTCCAAGCAGCATTTTCAAATTGAAGTTGACCAAACTCAATTTTGAGGGTTGCTCAATGCTTAGGACCTTTCCAGAAATACCAAATGACTGCCTGCTTGTCATCCTTGACTGA 2742 0.3669 MSDPTTPKYDVFLSFRGEDTRDNFTSHLYAELCRKKIETFIDNRLGRGEDISPALYEAIEESTIYVIILSEHYASSSWCLDELTEILKCKERYGREVIPVFYKVDPSNVRHQRQSYADDFVKHHQRFGGKVDAWKAALTQVAGLSGWDSQVTRPESTLVTEIVKDIVKKLNRCVSNDYEGMTGIDNHIEKIQSLLLLELPTVRIIGIWGMGGIGKTTIASAVFEKLATQFNYKIIILNVQQEIERVGVDHVKSKYLTKLLGEDISSSEYNFSFDPRLKRMKVLLVFDDVKDSDQLKDLIGTHSNFGQGSRIILTSRDKQVLMNANVDEIYQVRQMNSQDSLQVFYSFAFKQNRPLEETYVSLSKQVLDYAKGVPLALKVLGSLLYGRTKEAWESELQKLKKLPDHKIFSLLKLSYDGLDSEQKNIFLDIACFYRGERGKFVENALDRCGFSARIGMDVLEDRCLISISKYGEVWMHDLIQEMGHAIVQLENKDPGKRSRLWKSDDIYDVLKKNKGKGTDAIQCIFLDMTKIKEDIQLHADTFKKMHNLRMINFYNRYAFFCYPIVILYCSFLKSLPDELKFLHWDCFPQRSLPLEFCPRNLVTLEMSSSDLEQLWEGDQALPNLKRLNLSYSQKLIAVPDHSFSPNIEEVILSECISLTQVYSSSFLNNLYILSVAGCTELKSIDIPSNILSRPSGLVSLSNCYNLETLLISSRTTDHVVQFTHSYSYYKFERMKSCFEETEIQMNDEGDYEIWESFSDPVVTSINDFYWLDISNCESLTCLPAELLNLKFLKTLDLSGCLKLEELPEIKETMENLKALILDETAIKELPSSLYRLVGLEELSLKKCRRLKTIPSFIGNLSKLLELNLAYCESLETFPSSIFKLKLTKLNFEGCSMLRTFPEIPNDCLLVILD* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0950 913 Gene3D - 4 171 IPR035897 -
Tpr3g0950 913 SUPERFAMILY L domain-like 475 900 - -
Tpr3g0950 913 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 147 IPR035897 -
Tpr3g0950 913 SMART till_3 8 144 IPR000157 GO:0007165
Tpr3g0950 913 Pfam NB-ARC domain 185 401 IPR002182 GO:0043531
Tpr3g0950 913 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 429 IPR027417 -
Tpr3g0950 913 Gene3D Ribonuclease Inhibitor 475 721 IPR032675 -
Tpr3g0950 913 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 6 714 - -
Tpr3g0950 913 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 760 854 - -
Tpr3g0950 913 Pfam TIR domain 8 182 IPR000157 GO:0007165
Tpr3g0950 913 Gene3D - 172 330 IPR027417 -
Tpr3g0950 913 Gene3D - 334 419 IPR042197 -
Tpr3g0950 913 ProSiteProfiles TIR domain profile. 7 170 IPR000157 GO:0007165
Tpr3g0950 913 Gene3D Ribonuclease Inhibitor 722 913 IPR032675 -
Tpr3g0950 913 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 760 854 IPR044974 GO:0006952
Tpr3g0950 913 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 714 IPR044974 GO:0006952
Tpr3g0950 913 Pfam Leucine Rich Repeat 600 619 IPR011713 -
Tpr3g0950 913 PRINTS Disease resistance protein signature 204 219 - -
Tpr3g0950 913 PRINTS Disease resistance protein signature 276 290 - -
Tpr3g0950 913 PRINTS Disease resistance protein signature 370 384 - -
Tpr3g0950 913 PRINTS Disease resistance protein signature 787 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0950 Tpr-Chr3 8772024 8793219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0950 770 885 WRKY Transcription Factor Family AT4G12020 42.241 3.25e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0950 - - gmx:100814075 991.49