Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0931 ATGGCAAAGGGTTGCTCCAGCAACAGCTATGAAGAGGTTAAGAAACAAAGAGTTGAAGAAAACAAAAAGAGGTTTGAGGAATTAGGGATTTCAAAGATGTCAAAAAATTTGACCAAGGTCACAAGTCCTGCGAAGAAGTCCCAGAATCGCCTTCCCAAACTAAAATTAAAGACTAGTGAAGTGGAACCTAGGCGCTCTTCTCGTCCAAGAAACCATGTTAAGTCATACACTGAAGAGTTTAGCACAGACCTTCCAGATAGGAGTTCATATATGCGGAAGAGGTCAAGGTCAAGGTCAAGTTCATCATCATGGGAAAGCTACGTTGCAAGGCCTCTAGATGAAATCAAAGTAGCTACAGAAAGAGAAAGAAGGTGTGCTTACGAGGCTGCAGAGGCACTCCAAATCAAGTTGCAATCTTCAAAGCCATCATTTATCAAATCAATGGTCCGGTCTCATGTTTATAGTTGTTTTTGGTTGGGTCTTCCTAATAGATTTTGTGTGGAACACCTTCCAACAACGGGGTCTAACATGACTTTAGAGGATGAAGATGGCTCAGAGTATGATGCCAAATACATTGGTAGTAGAAGTGGGCTAAGTGGTGGCTGGAGAGCTTTTGCATTGGAACACAAATTGGATGATGGCGATGCACTTGTTTTTGAATTGGTTGAACCAGCAAGGTTTAAGATTTATATTGTTAGAGCATTTCCAAATGTAGATGAAGAGGAAAACGAAGAAGAAAACGCTACTACTCTTGAGCCAAAAGGTGAAGCACAAAATGAAATTGCGAAACCAAAGACTAGATCTTCTCAGAAACAAATGCAAAAGATGTCTGAAGTATCTACTGCTCTTGAATCAAAAGATGAAGCGCAAAATGAAATTGTGAAACCAAAGACTAGATCTTCTAAAAAACAAATGCAAAAAATGTCTGAAGTATCTACTGGTCTTGAATCAAAAGAGGAAGCACTTGAAACTGTGAAGCCGAAGGCAGCTGCAAAGTTGTCAAACAAGAAAAAAAAGTCGAAAGAAGGTAATGAATGTGAAATTGATCATTCAATCAATACCGAGCAGCTTCTTCCTAAAGATAATGTTGTTGAAACTGTCAATGCTAACGTGAGTAAGAAGAAAGAACATGATCTTGAGTCAACAAAAGATAAACCAGATGAAAAACGAGCTCCTAAGTTTTTTCGAAAAAAATCAGCTCCTAAGTTTTTCCGGAAGAGAGTATAG 1227 0.3888 MAKGCSSNSYEEVKKQRVEENKKRFEELGISKMSKNLTKVTSPAKKSQNRLPKLKLKTSEVEPRRSSRPRNHVKSYTEEFSTDLPDRSSYMRKRSRSRSSSSSWESYVARPLDEIKVATERERRCAYEAAEALQIKLQSSKPSFIKSMVRSHVYSCFWLGLPNRFCVEHLPTTGSNMTLEDEDGSEYDAKYIGSRSGLSGGWRAFALEHKLDDGDALVFELVEPARFKIYIVRAFPNVDEEENEEENATTLEPKGEAQNEIAKPKTRSSQKQMQKMSEVSTALESKDEAQNEIVKPKTRSSKKQMQKMSEVSTGLESKEEALETVKPKAAAKLSNKKKKSKEGNECEIDHSINTEQLLPKDNVVETVNANVSKKKEHDLESTKDKPDEKRAPKFFRKKSAPKFFRKRV* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0931 408 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 4 248 IPR044837 -
Tpr3g0931 408 SMART B3_2 144 235 IPR003340 GO:0003677
Tpr3g0931 408 MobiDBLite consensus disorder prediction 355 369 - -
Tpr3g0931 408 MobiDBLite consensus disorder prediction 370 394 - -
Tpr3g0931 408 MobiDBLite consensus disorder prediction 239 408 - -
Tpr3g0931 408 Gene3D - 117 235 IPR015300 -
Tpr3g0931 408 MobiDBLite consensus disorder prediction 53 80 - -
Tpr3g0931 408 SUPERFAMILY DNA-binding pseudobarrel domain 137 233 IPR015300 -
Tpr3g0931 408 MobiDBLite consensus disorder prediction 25 80 - -
Tpr3g0931 408 MobiDBLite consensus disorder prediction 262 287 - -
Tpr3g0931 408 Coils Coil 405 408 - -
Tpr3g0931 408 Pfam B3 DNA binding domain 144 232 IPR003340 GO:0003677
Tpr3g0931 408 ProSiteProfiles B3 DNA-binding domain profile. 144 235 IPR003340 GO:0003677
Tpr3g0931 408 MobiDBLite consensus disorder prediction 34 48 - -
Tpr3g0931 408 CDD B3_DNA 142 233 IPR003340 GO:0003677
Tpr3g0931 408 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS05G0481400 4 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0931 Tpr-Chr3 8601282 8606499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0931 9 257 B3 DNA Binding Superfamily AT5G58280 45.455 5.14e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tpr3g0931 B3 1.8e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0931 - - cam:101498339 352.058